DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-3 and LOC3291277

DIOPT Version :10

Sequence 1:NP_725048.1 Gene:Smyd4-3 / 36234 FlyBaseID:FBgn0033633 Length:660 Species:Drosophila melanogaster
Sequence 2:XP_564258.2 Gene:LOC3291277 / 3291277 VectorBaseID:AGAMI1_001411 Length:1309 Species:Anopheles gambiae


Alignment Length:616 Identity:143/616 - (23%)
Similarity:238/616 - (38%) Gaps:161/616 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 KNASLAAEIKERATSAF--KAKKWLEAMMLYTRSYVALPSENVAEIR-VVLANRSATLYHMQKYQ 130
            |:.:.|...::|....|  ...|:||::..|..|...  ||..:|.| :...|||.....:...|
Mosquito    69 KDNAKALAARKRGNELFVPMQGKYLESLQHYNESIAY--SEPGSEARALAYGNRSVVCLKLGLSQ 131

  Fly   131 ECLIDIKRALDLSYSKDLIYKLYERQARCYMALKDYPHTIDSFKKCITAMDDSTLASDKRAKLNL 195
            |||.:|:.|...:|...|:.||.:|:              ...|:||                  
Mosquito   132 ECLENIRLARASNYPARLMNKLNKRE--------------QDVKRCI------------------ 164

  Fly   196 DAMTMIKMLQNDPRTAKQEAKQQKQKI-ALDQAKPV-KLENE------FVSPLVRIDSNRQEGRF 252
                     :||.:...:.......|. |.:...|| :|..|      .::..|.:..|.|.||.
Mosquito   165 ---------ENDAQIIPRRVTHTPGKYWARETGCPVLQLSYEAHANIPHLAKCVELRQNSQYGRH 220

  Fly   253 ARASADVKPGEELLVERPFVSVL--LEKFAK-THCENCFMRTVVPVACPRCADVLYCSEQCREEA 314
            ...:..:|.|:..|:|:|:.::|  .|::.: ..|:|....|::|  |..|...:|||::|.::|
Mosquito   221 LVTTQHLKAGDVFLIEKPYANLLCDTERYKRCAFCQNEDTFTLIP--CEGCTVAMYCSKECMDKA 283

  Fly   315 SKKYHKYECGIVPIIWR-SGASINNHIALRIIAS------KPLDYFLKLKPTIDE---------- 362
            .|:||:||||::...|| .|......:.||.:|:      :.|:.::....|:||          
Mosquito   284 HKQYHRYECGVLRDCWRIVGHLFGGMVGLRTVATAIASFDQDLEGWIDHLNTLDEANVNAFTVDW 348

  Fly   363 -ELTPEQLISLPKDDFRRVAQLERHQGERQPSN--FFQHVLMARFLTN------CLRAGGYFGSE 418
             |:|...:.    |....:|..::.:|.:..|.  ||..::....|..      |         |
Mosquito   349 NEVTDSDMY----DTVHVLATNQKRRGRKDLSKLIFFTSIVHLLLLERTELGPLC---------E 400

  Fly   419 PKPDEVSIICSLVLRSLQFIQFNTHEV--------------------------AELHKFSSSGRE 457
            ..|....::..|:||.:|....|...|                          .|..:::..|.|
Mosquito   401 SNPARSKLLFDLLLRHVQTSLINKKGVYHMTRSKDDEEDDEYEDNYFGYDRDDEEEQEYTDYGEE 465

  Fly   458 KSIFIGGAIYPTLALFNHSCDPGV--VRYFRGTTIHINSVRPIEAGLPINENYGPMYTQDERSER 520
            ....   |:||..::.||||.|.|  :....|....:.: |||.||..:.:.|..:..:.:.|.|
Mosquito   466 THAI---AVYPLFSMVNHSCIPNVAPIHLLDGRCAFVAN-RPIAAGEQLFDVYDFLTMEFDPSFR 526

  Fly   521 QARLKDLYWFECSCDACIDNWPKFDDLPRDVIRFRCDAPNNCSAVIEVPPSCNDFMVKCVTCGEI 585
            :..||..|:|.|.|.||...||    :|     ||     |.|...|      .|:   :...|:
Mosquito   527 RYCLKQSYFFNCRCPACQSGWP----MP-----FR-----NKSLAEE------HFL---LLLREM 568

  Fly   586 TNILKGLKVMQDTEMMTRTAKRLYETGEYPK 616
            .|:::||..:  .|.|.:..:      .|||
Mosquito   569 DNVVQGLPRL--VEYMNQAGR------HYPK 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd4-3NP_725048.1 TPR repeat 74..103 CDD:276809 8/30 (27%)
TPR repeat 108..142 CDD:276809 11/34 (32%)
TPR repeat 150..177 CDD:276809 4/26 (15%)
SET_SMYD4 235..537 CDD:380934 86/364 (24%)
zf-MYND 284..323 CDD:460312 15/38 (39%)
LOC3291277XP_564258.2 None

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