DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-3 and LOC3289638

DIOPT Version :10

Sequence 1:NP_725048.1 Gene:Smyd4-3 / 36234 FlyBaseID:FBgn0033633 Length:660 Species:Drosophila melanogaster
Sequence 2:XP_566179.1 Gene:LOC3289638 / 3289638 VectorBaseID:AGAMI1_014221 Length:526 Species:Anopheles gambiae


Alignment Length:531 Identity:130/531 - (24%)
Similarity:220/531 - (41%) Gaps:116/531 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 QAGDANLVVNQEFAGKNASLAAE--IKERATSAFKAKKWLEAMMLYTRSYVALPSENVAEIRVVL 116
            :||...|:|:    ||:...|||  ::..|......|::::|:.||.:| :|..::...|.....
Mosquito     7 RAGQQGLLVD----GKDNRKAAELCVEGNAMHYNNVKRYMDAVKLYNKS-IAYSTKGSPERAQAY 66

  Fly   117 ANRSATLYHMQKYQECLIDIKRALDLSYSKDLIYKLYERQARCYMALKDYPHTIDSFKKCITAMD 181
            ..||.....:.:|.:|..:::.|.| |....|:.:..:...||..::            .::|.|
Mosquito    67 WERSKVCVKLNQYADCQQNLRLARD-SDGPGLLRRKLDESERCARSM------------LLSATD 118

  Fly   182 DSTLASDKRA----KLNLDAMTMIKMLQNDPRTAKQEAKQQKQKIALDQAKPVKLENEFVSPLVR 242
            |:|..|.:..    ||:..|      .:|.||.|.          .|:..:         ||   
Mosquito   119 DATPGSSRHGAAPLKLSFPA------YENAPRVAN----------CLEMRR---------SP--- 155

  Fly   243 IDSNRQEGRFARASADVKPGEELLVERPFVSVLLEKFAKTHCENC-----FMRTVVPVACPRCAD 302
                 |.||:.:.:..:|.|:.::::.|:||||..:|....|::|     |  |::|  |.||..
Mosquito   156 -----QYGRYLQTNKALKVGDVVMIDEPYVSVLEPEFCYARCDHCQRPAPF--TLIP--CERCTK 211

  Fly   303 VLYCSEQCREEASKKYHKYECGIV---------PII---WRSGASI--------------NNHIA 341
            .:|||:.|...|..:||::||.:|         |::   ||:....              .|:::
Mosquito   212 AMYCSKNCLRRARTEYHEFECALVHHLTETTRDPVVLLAWRAVTRAISTYRYNLRHLKQRRNYLS 276

  Fly   342 LRIIASKPLDYFLKLKPTIDEELTPEQLISLPKDDFR-RVAQLERHQGERQPSNFFQHVLMARFL 405
            ...:....|::....|...........|...|.|... ||||:.|.          .|..:..  
Mosquito   277 RTEVNPLMLNWVDGQKIAFSAVYILASLARAPNDPVEARVAQISRE----------MHCHLVS-- 329

  Fly   406 TNCLRAGGYFGSEPKPDEVSIICSLVLRSLQFIQFNTHEVAELHKFSSSGREKSIFIGGAIYPTL 470
            .|...|....||.|.| .|..:|   .|.|:.:|.|........:....|:.:::......:|.:
Mosquito   330 ENGQTANDDSGSVPYP-WVGEMC---YRFLKVMQCNARPAQLTRRDEPEGQYRAVPFALRCHPLI 390

  Fly   471 ALFNHSCDPGV----VRYFRGTTIHINSVRPIEAGLPINENYGPMYTQDERSERQARLKDLYWFE 531
            :|.||||.|.|    :|..|.:.:   .::||.||..:..|||..|.|..|.||:..|:.::.|.
Mosquito   391 SLLNHSCAPNVKCFDLRDGRCSAV---VIQPIAAGGQLFANYGYDYLQTGRDERREGLQRVFGFT 452

  Fly   532 CSCDACIDNWP 542
            |:||||.:|:|
Mosquito   453 CNCDACENNYP 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd4-3NP_725048.1 TPR repeat 74..103 CDD:276809 9/30 (30%)
TPR repeat 108..142 CDD:276809 6/33 (18%)
TPR repeat 150..177 CDD:276809 2/26 (8%)
SET_SMYD4 235..537 CDD:380934 86/337 (26%)
zf-MYND 284..323 CDD:460312 15/43 (35%)
LOC3289638XP_566179.1 SET 143..458 CDD:394802 90/364 (25%)

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