DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-3 and Smyd5

DIOPT Version :10

Sequence 1:NP_725048.1 Gene:Smyd4-3 / 36234 FlyBaseID:FBgn0033633 Length:660 Species:Drosophila melanogaster
Sequence 2:NP_659167.2 Gene:Smyd5 / 232187 MGIID:108048 Length:416 Species:Mus musculus


Alignment Length:368 Identity:90/368 - (24%)
Similarity:145/368 - (39%) Gaps:86/368 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 IDSNRQEGRFARASADVKPGEELLVERPFV------SVLLEKFAKTHC----------------- 284
            :||.:.:|.|  |:..::.||.:.:|||.|      :.|.:..|..||                 
Mouse    28 VDSIKGKGLF--ATQLIRKGETIFIERPLVAAQFLWNALYQYRACDHCLRALEKAEENAQRLTGK 90

  Fly   285 --------ENCFMRTVVPVACPRCADVLYCSEQCREEASKKYHKYEC-----------GIVPIIW 330
                    |.|.:|..:...||.| .|:|||.:||..|:::||:..|           ..:...|
Mouse    91 PSQILPHPELCSVRKDLHQNCPHC-QVMYCSAECRLAAAEQYHQILCPGPSHDPRHPLNKLQEAW 154

  Fly   331 RS------GASINNHIALRIIA----SKPLDYFLKL-KPTIDEELTPEQLI--SLPKDDFRRVAQ 382
            ||      .|||  .:..|::|    :|..|::::| ..........||.|  .|.|..|:  .|
Mouse   155 RSVHYPPETASI--MLMARMVATVKQAKDKDHWVRLFNHFCSRTANQEQAIVHKLLKGKFK--DQ 215

  Fly   383 LERHQGERQPSNFFQHVLMARFLTNCLRA--------GGYFGSEPKPDEVSIICSLVLRSLQFIQ 439
            ||...|..:.: .::..|...|.....|:        |...|:......|....:|.|......|
Mouse   216 LELLLGLFKEA-LYEEALSLWFTPEGFRSLFALVGTNGQGIGTSSLSQWVHACDALELTPQDREQ 279

  Fly   440 FNTHEVAELHK--FSSSGREKSIFI---GGAIYPTLALFNHSCDPGVVRYF--RGTTIHINSVRP 497
            .:|. :.:|:|  .:::|.    |:   |..::...:..||||.|.....|  ....:|:.::..
Mouse   280 LDTF-IDQLYKDIEAATGE----FLNCEGSGLFVLQSCCNHSCVPNAETSFPENNFVLHVTALED 339

  Fly   498 IEAGLPINENYGPMYTQDERS--ERQARLKDLYWFECSCDACI 538
            |:.|..|..:|... .|.|||  .|...|::.|.|.|||..|:
Mouse   340 IKPGEEICISYLDC-CQRERSRHSRHKILRENYLFNCSCPKCL 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd4-3NP_725048.1 TPR repeat 74..103 CDD:276809
TPR repeat 108..142 CDD:276809
TPR repeat 150..177 CDD:276809
SET_SMYD4 235..537 CDD:380934 89/365 (24%)
zf-MYND 284..323 CDD:460312 16/63 (25%)
Smyd5NP_659167.2 SET_SMYD5 22..383 CDD:380919 90/368 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 383..416
Blue background indicates that the domain is not in the aligned region.

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