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Protein Alignment Smyd4-3 and Smyd1

DIOPT Version :9

Sequence 1:	NP_725048.1	Gene:	Smyd4-3 / 36234	FlyBaseID:	FBgn0033633	Length:	660	Species:	Drosophila melanogaster
Sequence 2:	NP_001153599.1	Gene:	Smyd1 / 12180	MGIID:	104790	Length:	490	Species:	Mus musculus

Alignment Length:	430	Identity:	91/430 - (21%)
Similarity:	160/430 - (37%)	Gaps:	107/430 - (24%)

- Green bases have known domain annotations that are detailed below.

  Fly   232 LENEFVSPLVRIDSNRQEGRFARASADVKPGEELLVERPFVSVLLEKFAKTHCENCFMRTVVPVA 296
            :||      |.:.::..:||..:|:.:....:.:..||.:.:|:.:......|..||.|......
Mouse     6 MEN------VEVFTSEGKGRGLKATKEFWAADVIFAERAYSAVVFDSLINFVCHTCFKRQEKLHR 64

  Fly   297 CPRCADVLYCSEQCREEASKKYHKYECGIVPIIWRSGASINNHIALRIIASKPLDYFLKLKPTID 361
            |.:|....||...|:::|... ||.||..:.   :.|...|.:|.|.          .::...::
Mouse    65 CGQCKFAHYCDRTCQKDAWLN-HKNECAAIK---KYGKVPNENIRLA----------ARIMWRVE 115

  Fly   362 EE---LTPEQLISLPKDDFRRVAQLERHQGERQPSNFFQHVLMARFLTNCLRAGGYFGSEPKPDE 423
            .|   ||...|:|:  ||.:               |..:|                ||.| :..|
Mouse   116 REGTGLTEGCLVSV--DDLQ---------------NHVEH----------------FGEE-EQKE 146

  Fly   424 VSIICSLVL-----RSLQF-IQFNTH--EVAELHKFSSSGREKSIFIGGAIYPTLALFNHSCDPG 480
            :.:.....|     :|.|| :|:.:|  .|...:.|:.|.:.....:|..|:|.|.|.||.|.|.
Mouse   147 LRVDVDTFLQYWPPQSQQFSMQYISHIFGVINCNGFTLSDQRGLQAVGVGIFPNLGLVNHDCWPN 211

  Fly   481 VVRYFRG-------------TTIHINSVRPIEAGLPINENYGPMYTQDERSERQARLKDLYWFEC 532
            ....|..             ..|.:.::..|..|..:..:|.......|  ||:.:||..|:|:|
Mouse   212 CTVIFNNGNHEAVKSMFHTQMRIELRALGKISEGEELTVSYIDFLHLSE--ERRRQLKKQYYFDC 274

  Fly   533 SCDAC-----------IDNWPK-FDDLPRDVIRF------RCDAPNNCSAVIEVPPSCNDFMVKC 579
            ||:.|           ....|| ..::.:::|:|      :.|...:.....||...|.:.:.|.
Mouse   275 SCEHCQKGLKDDLFLAAKEDPKPSQEVVKEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQ 339

  Fly   580 VTCGEITN--ILKGLKV-------MQDTEMMTRTAKRLYE 610
            ......||  :|:.|.:       :|..|..:..|:|:.:
Mouse   340 EPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVD 379

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.