DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30022 and Pnkd

DIOPT Version :10

Sequence 1:NP_725047.2 Gene:CG30022 / 36233 FlyBaseID:FBgn0050022 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_001128222.1 Gene:Pnkd / 100188944 RGDID:2300155 Length:385 Species:Rattus norvegicus


Alignment Length:235 Identity:68/235 - (28%)
Similarity:102/235 - (43%) Gaps:52/235 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 QLFDGE--------SSTYSYLLADLKNGQAVIIDPVLEQAKRDAQLVKDLGFELKYAINTHMHAD 108
            :||:|.        |..||||:.|.:.|.||.:||...:|.: |.:.|: ...|...:.||.|.|
  Rat   114 RLFNGVKVLPIPVLSDNYSYLIIDTQAGLAVAVDPSDPRAVQ-ASIEKE-RVNLVAILCTHKHWD 176

  Fly   109 HITGSGWL-RKLTGCQSVIAAASGAKADRH-LNEGDRIDFGTHVIDALATPGHTNGCMTYVI--- 168
            |..|:..| |:...|:...:...|.....| |...|.:..|...|.||||||||.|.:.|::   
  Rat   177 HSGGNRDLSRRHRDCRVYGSPQDGIPYLTHPLCHQDVVSVGRLQIRALATPGHTQGHLVYLLDGE 241

  Fly   169 --KDQGCVFTGDTLLIRGCGRTDFQEGCPRNLYENVHSKIFTLPENFRIYPAHDY---------- 221
              |...|:|:||.|.:.|||||  .||....:..::.: :..|.::..::|.|:|          
  Rat   242 PYKGPSCLFSGDLLFLSGCGRT--FEGTAETMLSSLDT-VLDLGDDTLLWPGHEYAEENLGFAGV 303

  Fly   222 ----------------------KGQMESSVWEEKRYNPRL 239
                                  |....|::.||:.|||.|
  Rat   304 VEPENVARERKMQWVQRQRMERKSTCPSTLGEERAYNPFL 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30022NP_725047.2 PLN02962 45..277 CDD:178547 68/235 (29%)
PnkdNP_001128222.1 GSH_gloB 121..380 CDD:274569 65/228 (29%)

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