DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sod3 and sod3b

DIOPT Version :10

Sequence 1:NP_001033939.2 Gene:Sod3 / 36232 FlyBaseID:FBgn0033631 Length:243 Species:Drosophila melanogaster
Sequence 2:XP_073808863.1 Gene:sod3b / 794006 ZFINID:ZDB-GENE-030131-8743 Length:204 Species:Danio rerio


Alignment Length:145 Identity:62/145 - (42%)
Similarity:79/145 - (54%) Gaps:11/145 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 QVKGNVTFTQNDCGQNVHVRVQLEGL---KEGKHGFHIHEKGDLTNGCISMGAHYNPDKVDHGGP 103
            :|.|::.|.|:...:.:.|..:|.||   .:.....||||.|||:.||.|.|.||||..|:|   
Zfish    66 RVYGHILFRQSGPKEKLSVTFRLYGLPADSQQPRAMHIHEYGDLSRGCDSTGGHYNPLNVNH--- 127

  Fly   104 DHEVRHVGDLGNLEANSTGIIDVTYTDQVITLTGKLGIIGRGVVVHELEDDLGLGNHTDSKKTGN 168
               .:|.||.||....:..|..  ..|...||.|||.|.||.||:||.:||||.|.:..|...||
Zfish   128 ---PQHPGDFGNFVPINKKIRQ--SLDSPATLFGKLSIAGRSVVIHEGKDDLGRGGNVGSLLNGN 187

  Fly   169 AGGRIACGVIGINGP 183
            ||||:||.|||:..|
Zfish   188 AGGRLACCVIGLRNP 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sod3NP_001033939.2 Sod_Cu 43..178 CDD:459663 58/137 (42%)
sod3bXP_073808863.1 None

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