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Protein Alignment Sod3 and sod3b
DIOPT Version :9
Sequence 1: | NP_001033939.2 |
Gene: | Sod3 / 36232 |
FlyBaseID: | FBgn0033631 |
Length: | 243 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_001332758.1 |
Gene: | sod3b / 794006 |
ZFINID: | ZDB-GENE-030131-8743 |
Length: | 192 |
Species: | Danio rerio |
Alignment Length: | 145 |
Identity: | 61/145 - (42%) |
Similarity: | 80/145 - (55%) |
Gaps: | 11/145 - (7%) |
- Green bases have known domain annotations that are detailed below.
Fly 42 QVKGNVTFTQNDCGQNVHVRVQLEGL---KEGKHGFHIHEKGDLTNGCISMGAHYNPDKVDHGGP 103
:|.|::.|.|:...:.:.|..:|.|| .:.....||||.|||:.||.|.|.||||..|:|
Zfish 54 RVYGHILFRQSGPKEKLSVTFRLYGLPADSQQPRAMHIHEYGDLSRGCDSTGGHYNPLNVNH--- 115
Fly 104 DHEVRHVGDLGNLEANSTGIIDVTYTDQVITLTGKLGIIGRGVVVHELEDDLGLGNHTDSKKTGN 168
.:|.||.||....:..|.. ..:...||.|||.|:||.||:||.:||||.|.:..|...||
Zfish 116 ---PQHPGDFGNFVPVNKKIRQ--SLESPATLFGKLSIVGRSVVIHEGKDDLGRGGNVGSLLNGN 175
Fly 169 AGGRIACGVIGINGP 183
||||:||.|||:..|
Zfish 176 AGGRLACCVIGLRNP 190
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Sod3 | NP_001033939.2 |
Sod_Cu |
42..178 |
CDD:278508 |
57/138 (41%) |
sod3b | XP_001332758.1 |
Sod_Cu |
55..185 |
CDD:278508 |
57/137 (42%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG2032 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1574423at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR10003 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
1 |
0.960 |
- |
- |
|
|
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
6 | 5.880 |
|
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