Protein Alignment Sod3 and Ccs

DIOPT Version :9

• Sequence 1: NP_001033939.2
• Gene: Sod3 / 36232
• FlyBaseID: FBgn0033631
• Length: 243
• Species: Drosophila melanogaster
• Sequence 2: NP_001163108.1
• Gene: Ccs / 46035
• FlyBaseID: FBgn0010531
• Length: 264
• Species: Drosophila melanogaster
• Alignment Length: 158
• Identity: 67/158 - (42%)
• Similarity: 85/158 - (53%)
• Gaps: 9/158 - (5%)

  Fly    27 QAIAYLIGPVQS--DNTQVKGNVTFTQNDCGQNVHVRVQ--LEGLKEGKHGFHIHEKGDLTNGCI 87
            |:...||....|  |.|.::|.|.||.....:...|.|.  ::||..|.||.||||.||.:.||.
  Fly    72 QSAVALINTTGSVVDKTPIQGVVRFTTITADKKPGVVVDGVVDGLSPGLHGLHIHESGDTSAGCS 136

  Fly    88 SMGAHYNPDKVDHGGP--DHEVRHVGDLGNLEANSTGIIDVTYTDQVITLTGKLGIIGRGVVVHE 150
            |:|.||||.:..||.|  ..|.||.|||||:.|:..|.....:.|.|:.:   ..||||.||:..
  Fly   137 SVGEHYNPRQSPHGSPAAGAEERHAGDLGNIRADENGRATFRFVDPVLEV---WDIIGRAVVLTA 198

  Fly   151 LEDDLGLGNHTDSKKTGNAGGRIACGVI 178
            ..||||.|.:..|...||:|.|||||:|
  Fly   199 NADDLGRGGNDQSLIDGNSGERIACGII 226

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sod3	NP_001033939.2	Sod_Cu	42..178	CDD:278508	60/139 (43%)
Ccs	NP_001163108.1	PLN02957	1..253	CDD:215516	67/158 (42%)
		HMA	5..64	CDD:238219
		Cu-Zn_Superoxide_Dismutase	72..223	CDD:238186	63/153 (41%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45466840
Domainoid	1	1.000	57	1.000	Domainoid score	I612
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	57	1.000	Inparanoid score	I436
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D608177at33208
OrthoFinder	1	1.000	-	-		FOG0000641
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR10003
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	7	7.000