DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sod3 and sod1

DIOPT Version :10

Sequence 1:NP_001033939.2 Gene:Sod3 / 36232 FlyBaseID:FBgn0033631 Length:243 Species:Drosophila melanogaster
Sequence 2:NP_593163.1 Gene:sod1 / 2542128 PomBaseID:SPAC821.10C Length:154 Species:Schizosaccharomyces pombe


Alignment Length:156 Identity:81/156 - (51%)
Similarity:99/156 - (63%) Gaps:6/156 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 IQAIAYLIGPVQSDNTQVKGNVTFTQNDCGQNVHVRVQLEGL-KEGKHGFHIHEKGDLTNGCISM 89
            ::|:|.|.|     :::|.|.|||.|.|....|.|.|.|.|. ...|.|||||:.||.||||.|.
pombe     2 VRAVAVLRG-----DSKVSGVVTFEQVDQNSQVSVIVDLVGNDANAKRGFHIHQFGDNTNGCTSA 61

  Fly    90 GAHYNPDKVDHGGPDHEVRHVGDLGNLEANSTGIIDVTYTDQVITLTGKLGIIGRGVVVHELEDD 154
            |.|:||:...||.....|||||||||||:::.|.|..|::|.||:|.|...||||.:|:|..|||
pombe    62 GPHFNPEGKTHGDRTAAVRHVGDLGNLESDAQGNIKTTFSDSVISLFGANSIIGRTIVIHAGEDD 126

  Fly   155 LGLGNHTDSKKTGNAGGRIACGVIGI 180
            ||.|...:|.||||||.|.|||||||
pombe   127 LGKGTSEESLKTGNAGARNACGVIGI 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sod3NP_001033939.2 Sod_Cu 43..178 CDD:459663 73/135 (54%)
sod1NP_593163.1 Sod_Cu 14..150 CDD:459663 73/135 (54%)

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