DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp47F and CD9

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_001400170.1 Gene:CD9 / 928 HGNCID:1709 Length:255 Species:Homo sapiens


Alignment Length:274 Identity:66/274 - (24%)
Similarity:108/274 - (39%) Gaps:68/274 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GPSLIKYVLFAFNVLFAISGLGI--------------------LIAGAVVLA------------- 36
            |...|||:||.||.:|.:..|.:                    ::||..|||             
Human     6 GTKCIKYLLFGFNFIFWLKSLRVPERKAGRSGAPLFGPRPRRTVLAGIAVLAIGLWLRFDSQTKS 70

  Fly    37 ----DVNEFN-HFVEGRVLAPPIVLIVTGLIIFLIASLGCFGAIKESPTLLITFAVLLAVIFIVE 96
                :.|..| .|..|     ..:||..|.::.|:..|||.||::||..:|..|...|.|||.:|
Human    71 IFEQETNNNNSSFYTG-----VYILIGAGALMMLVGFLGCCGAVQESQCMLGLFFGFLLVIFAIE 130

  Fly    97 LAVGIAASVFKKDLEGMVKNSLQESIKRSNSEDTMAWDN---IQQKLMCCGVDSPADWRTLSANK 158
            :|..|.....|.::...|:...:::..:..::|....:.   |...|.|||:....:        
Human   131 IAAAIWGYSHKDEVIKEVQEFYKDTYNKLKTKDEPQRETLKAIHYALNCCGLAGGVE-------- 187

  Fly   159 TLPGSCCQPQYIDSTVGHCLESPALGKDKYFQVGCVGKLKDRIEKNAIILIGVGIGIAFIQILGI 223
                     |:|...   |.:...|  :.:....|...:|:..:....|:..||||||.:.|.|:
Human   188 ---------QFISDI---CPKKDVL--ETFTVKSCPDAIKEVFDNKFHIIGAVGIGIAVVMIFGM 238

  Fly   224 VLACYLANSIRQER 237
            :.:..|..:||:.|
Human   239 IFSMILCCAIRRNR 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 62/262 (24%)
tetraspanin_LEL <134..205 CDD:351888 11/73 (15%)
CD9NP_001400170.1 Tetraspanin 10..246 CDD:459767 62/262 (24%)
CD9_LEL 138..220 CDD:239405 14/103 (14%)

Return to query results.
Submit another query.