DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp47F and tspan10

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:XP_001339579.3 Gene:tspan10 / 799194 ZFINID:ZDB-GENE-041111-201 Length:347 Species:Danio rerio


Alignment Length:255 Identity:67/255 - (26%)
Similarity:120/255 - (47%) Gaps:27/255 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LIKYVLFAFNVLFAISGLGILIAGAVVLADVNEF-NHFVEGRVLAPPIVLIVTGLIIFLIASLGC 71
            ::||:|.:.|:||...||..|:.|...|.:...| ...:.|....|.::.:..||::.|::..||
Zfish    88 ILKYLLISSNLLFTALGLATLVLGLWGLINKESFAQEKISGIGTDPMLLFLFLGLVLALLSMTGC 152

  Fly    72 FGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQESIKRSNSEDTMAW--D 134
            .||::|:..||..|:..:.::.:.::...:|....:..:|..::..:..:|.|...:..:.:  |
Zfish   153 IGALRENMCLLRIFSAAVFLLVVAQVLAAVALFSMQAQMEDYLRLGMLTAIVRYQDDLDLRFITD 217

  Fly   135 NIQQKLMCCGVDSPADWR-TLSANKTLPG--------SCCQPQYIDSTV--GHCLESPALGK--- 185
            .||..|.|||.|:..||. .:..|.:.||        |||.....:.||  ..|    .:|.   
Zfish   218 EIQTSLQCCGADTYRDWEINVYYNCSAPGVQACGVPPSCCIDPLENGTVWNSQC----GVGAQQL 278

  Fly   186 DKY------FQVGCVGKLKDRIEKNAIILIGVGIGIAFIQILGIVLACYLANSIRQERAK 239
            |::      |..||:|.:...:|.|..:::.|.|.:..||||.:.:...|.:.||..||:
Zfish   279 DEFSAQSVIFLGGCLGSVARWMEHNGGVIVTVVIVLLGIQILTLFITARLLHKIRWTRAQ 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 63/244 (26%)
tetraspanin_LEL <134..205 CDD:351888 26/90 (29%)
tspan10XP_001339579.3 None

Return to query results.
Submit another query.