DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and tspan5

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_001072198.1 Gene:tspan5 / 779644 XenbaseID:XB-GENE-868310 Length:268 Species:Xenopus tropicalis


Alignment Length:273 Identity:82/273 - (30%)
Similarity:129/273 - (47%) Gaps:53/273 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GPSL---IKYVLFAFNVLFAISG---LGI---------LIAGAVVLADVNEFNHFVEGRVLAPPI 54
            ||.:   |||.:|.|||:|.:.|   ||:         :::....:.|:..|:         |..
 Frog     8 GPEVSCCIKYFIFGFNVIFWLLGITFLGVGLWAWSEKGVLSNISSITDLGGFD---------PVW 63

  Fly    55 VLIVTGLIIFLIASLGCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFK---KD-LEGMVK 115
            :.:|.|.::|::...||.||::|:..||..|:|.|.:||.:||..|:.|.|||   || |:..:.
 Frog    64 LFLVVGGVMFILGFAGCIGALRENTFLLKFFSVFLGIIFFLELTAGVLAFVFKDWIKDQLQFFIN 128

  Fly   116 NSL---QESIKRSNSEDTMAWDNIQQKLMCCGVDSPADW------RTLSANKT-----LPGSCC- 165
            |::   ::.|...|     ..|..|:...|||.....||      ....||.:     :|.||| 
 Frog   129 NNIRAYRDDIDLQN-----LIDFTQEYWQCCGAFGADDWNLNIYFNCTDANASRERCGVPFSCCT 188

  Fly   166 ---QPQYIDSTVGHCL-ESPALGKDKYFQV-GCVGKLKDRIEKNAIILIGVGIGIAFIQILGIVL 225
               ....|::..|:.: :.|.|.:.:.... |||.:.:..::.|..|:.||.||||.:||.||.|
 Frog   189 KDPAEDVINTQCGYDVRQKPELDQQETIHTKGCVPQFEKWLQDNLTIVAGVFIGIALLQIFGICL 253

  Fly   226 ACYLANSIRQERA 238
            |..|.:.|...||
 Frog   254 AQNLVSDIEAVRA 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 77/257 (30%)
tetraspanin_LEL <134..205 CDD:351888 20/87 (23%)
tspan5NP_001072198.1 Tetraspanin 15..258 CDD:459767 76/256 (30%)
TM4SF9_like_LEL 113..233 CDD:239412 29/124 (23%)

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