DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp47F and tspan14

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:XP_073776075.1 Gene:tspan14 / 751700 ZFINID:ZDB-GENE-060825-329 Length:275 Species:Danio rerio


Alignment Length:257 Identity:69/257 - (26%)
Similarity:122/257 - (47%) Gaps:32/257 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KYVLFAFNVLFAISGLGILIAG------AVVLADVNEFNHFVEGRVLAPPIVLIVTGLIIFLIAS 68
            ||::|::|::|.::|...:..|      ..||:|:.:... :.|  ..|...::|.|.:.|::..
Zfish    20 KYLMFSYNIIFWLAGSAFIAIGFWAWSEKGVLSDLTQVTR-LHG--FDPVWGVLVVGTVTFILGF 81

  Fly    69 LGCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQESIK--RSNSEDTM 131
            .||.||::|:..||..|:.::..||.:||...:.|.||:..:...:......::|  |.:.:...
Zfish    82 AGCVGALRENICLLKFFSGVIGFIFFLELTAAVLAFVFQGQVREWISEFFLANVKAYRDDIDLQN 146

  Fly   132 AWDNIQQKLMCCGVDSPADW-----------RTLSANKT-LPGSCC--QP--QYIDSTVGHCLES 180
            ..|::|:...|||...|.||           ..||..|. :|.|||  .|  ..:::..|:.:..
Zfish   147 LIDSLQKLNHCCGAKHPNDWNMNVYFNCSNKNNLSREKCGVPFSCCISDPAVTVLNTQCGYDVRE 211

  Fly   181 PALGKD---KYFQVGCVGKLKDRIEKNAIILIGVGIGIAFIQILGIVLACYLANSIRQERAK 239
            .....|   ..:..||:..|:|.:.:|..|:.||.|.|:.:|::||.||..|...|  |:.|
Zfish   212 KGTLNDWSSSIYIKGCIDALEDWLPRNLYIVAGVFIVISLLQMVGIFLARTLIGDI--EKVK 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 66/247 (27%)
tetraspanin_LEL <134..205 CDD:351888 22/89 (25%)
tspan14XP_073776075.1 None

Return to query results.
Submit another query.