DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and cd63l

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_001037906.1 Gene:cd63l / 733515 XenbaseID:XB-GENE-22164536 Length:244 Species:Xenopus tropicalis


Alignment Length:233 Identity:69/233 - (29%)
Similarity:124/233 - (53%) Gaps:11/233 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IKYVLFAFNVLFAISGLGILIAGAVVLADVNEFNHFVEGRVLAPPIVLIVTGLIIFLIASLGCFG 73
            :|..|....:||.::|:.::..||.|...:.:.:..:.......|:||.|||:|||:::..|...
 Frog    13 LKAGLLFIILLFWVTGVALICLGATVQLRLTDISVVLSETSSGAPLVLTVTGIIIFIMSGFGAIS 77

  Fly    74 AIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQESIKR--SNSEDTMAWDNI 136
            .:||:..|:.||..::.||||:|:.|||:|..:::.|:..:....|:.:.:  .:.:.|.:.|..
 Frog    78 VLKENNMLIKTFIGIMVVIFIIEIIVGISAYSYREKLQSDISRRFQQILSKYGIDGQLTRSLDYA 142

  Fly   137 QQKLMCCGVDSPADWRTLSAN---KTLPGSCCQPQYIDSTVGHCLESPALGKDKYFQVGCVGKLK 198
            ||:..|||..:..||..::..   .::|.|||:     .....|.|.....:|..|..|||.|:|
 Frog   143 QQEFRCCGAQNFTDWMNVTVTLLPSSVPKSCCR-----KVTPKCGEKVMAHQDNIFLEGCVIKMK 202

  Fly   199 DRIEKNAIILIGVGIGIAFIQILGIVLACYLANSIRQE 236
            ..|.::..::..||:|:.|:|:.||:|: :|...|.||
 Frog   203 TWISQHIDVIGAVGVGLGFVQLFGILLS-FLLVKILQE 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 66/226 (29%)
tetraspanin_LEL <134..205 CDD:351888 22/73 (30%)
cd63lNP_001037906.1 Tetraspanin 13..235 CDD:459767 66/227 (29%)
tetraspanin_LEL 108..209 CDD:351888 25/105 (24%)

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