DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and tspan36

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_001037876.1 Gene:tspan36 / 733459 XenbaseID:XB-GENE-5730963 Length:240 Species:Xenopus tropicalis


Alignment Length:227 Identity:56/227 - (24%)
Similarity:105/227 - (46%) Gaps:12/227 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KYVLFAFNVLFAISGLGILIAGAVVLADVNEFNHFVEGR-VLAPPIVLIVTGLIIFLIASLGCFG 73
            |..|...:::|..:.:|:...|...:....::.:.:... |:.|.::::...:::|:||.|||..
 Frog     9 KTFLLLVSLIFLAASVGLAYVGISTIVTYKQYENLLGNMYVMLPSVIILAIAVVMFVIAILGCCS 73

  Fly    74 AIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQESIKRSNSED--TMAWDNI 136
            ..:||...|..|..|:::||...:|..|...||...:...::.::....|..|..|  :...|.|
 Frog    74 TTQESCCGLGCFMFLISIIFAAGVAAMILGLVFVDKINPELEKNMDNLFKTYNGVDVSSSTVDFI 138

  Fly   137 QQKLMCCGVDSPADWRT---LSANKTLPGSCCQPQYIDSTVGHCLESPALGKDKYFQVGCVGKLK 198
            |::|.|||..:..||..   ...||:||.|||:....|     |.......||.|.: .|..||:
 Frog   139 QERLECCGRKNYTDWEETDWYQTNKSLPMSCCKKNAQD-----CQRVIGQQKDIYTE-ACEPKLE 197

  Fly   199 DRIEKNAIILIGVGIGIAFIQILGIVLACYLA 230
            :.|.:.....:.|.:|.|.:::..::..|.::
 Frog   198 NLIHQVLRYSMFVILGFAIVELFAMISICVIS 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 56/227 (25%)
tetraspanin_LEL <134..205 CDD:351888 25/73 (34%)
tspan36NP_001037876.1 Tetraspanin 8..230 CDD:459767 56/227 (25%)
tetraspanin_LEL 103..205 CDD:351888 30/107 (28%)

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