DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and TSPAN4

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_001426622.1 Gene:TSPAN4 / 7106 HGNCID:11859 Length:330 Species:Homo sapiens


Alignment Length:241 Identity:71/241 - (29%)
Similarity:124/241 - (51%) Gaps:28/241 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRSCGPS-----LIKYVLFAFNVLFAISGLGILIAGAVVLADVNEF----NHFVEGRVLAPPIVL 56
            ::.||.:     .:||::||||:||.:.|.|:|..|..:.|....|    :.|..   |:...:|
Human    88 LKRCGMARACLQAVKYLMFAFNLLFWLGGCGVLGVGIWLAATQGSFATLSSSFPS---LSAANLL 149

  Fly    57 IVTGLIIFLIASLGCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQES 121
            |:||..:..|..:||.|||||:..||:||.:||.::|::|..:.|....:...::...:..|::.
Human   150 IITGAFVMAIGFVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYAQQDLKKG 214

  Fly   122 I----KRSNSEDTMAWDNIQQKLMCCGVDSPADWRTLSANKTLPGSCCQPQYIDSTVGHC-LESP 181
            :    .:.|...|.||..||....||||.:..||..:.....:|.|||. ::.:|    | |.:|
Human   215 LHLYGTQGNVGLTNAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSCCL-EFSES----CGLHAP 274

  Fly   182 ALGKDKYFQVGCVGKLKDRIEKNAIILIGV-GIGIAFIQILGIVLA 226
            .    .:::..|...:|..:::| ::.:|: |:..|.:||||:..|
Human   275 G----TWWKAPCYETVKVWLQEN-LLAVGIFGLCTALVQILGLTFA 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 69/228 (30%)
tetraspanin_LEL <134..205 CDD:351888 18/71 (25%)
TSPAN4NP_001426622.1 None

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