DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and Tspan2

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_081809.2 Gene:Tspan2 / 70747 MGIID:1917997 Length:221 Species:Mus musculus


Alignment Length:248 Identity:63/248 - (25%)
Similarity:106/248 - (42%) Gaps:51/248 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GPSLIKYVLFAFNVLFAISGLGILIAG-----AVVLADVNEFN----HFVEGRVLAPPIVLIVTG 60
            |...|||:|..||:||.::|..::..|     ...:.|::..:    :|..|.     .||:..|
Mouse     7 GLRCIKYLLLGFNLLFWLAGSAVIAFGLWFRFGGTMKDLSSEDKSPEYFYVGL-----YVLVGAG 66

  Fly    61 LIIFLIASLGCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFK----KDLEGMVKNSLQES 121
            .::..:...||.||::||..:|.:|...|.|||..|:..|:.|.:.|    :.::.|.:.:..:.
Mouse    67 ALMMTVGFFGCCGAMRESQCVLGSFFTCLLVIFAAEVTTGVFAFIGKDVAIRHVQSMYEEAYSDY 131

  Fly   122 IK-RSNSEDTMAWDNIQQKLMCCGVDSPADWRTLSANKTLPGSCCQPQYIDSTVGHCLESPALGK 185
            :| |:....|:.  .......|||.:|....:. :..|.|||                       
Mouse   132 LKDRARGNGTLI--TFHSAFQCCGKESSEQVQP-TCPKELPG----------------------- 170

  Fly   186 DKYFQVGCVGKLKDRIEKNAIILIG-VGIGIAFIQILGIVLACYLANSIRQER 237
                ...|:.|::..|... :.||| ||||||.:.|.|::.:..|..:||..|
Mouse   171 ----HKNCIDKIETVISAK-LQLIGIVGIGIAGLTIFGMIFSMVLCCAIRNSR 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 59/236 (25%)
tetraspanin_LEL <134..205 CDD:351888 11/70 (16%)
Tspan2NP_081809.2 Tetraspanin 11..212 CDD:459767 59/236 (25%)

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