DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and Tspan4

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_001390287.1 Gene:Tspan4 / 64540 MGIID:1928097 Length:333 Species:Mus musculus


Alignment Length:228 Identity:70/228 - (30%)
Similarity:118/228 - (51%) Gaps:23/228 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IKYVLFAFNVLFAISGLGILIAGAVVLADVNEF----NHFVEGRVLAPPIVLIVTGLIIFLIASL 69
            :||::||||:||.:.|.|:|..|..:.|....|    :.|..   |:...:|||||..:..|..:
Mouse   104 VKYLMFAFNLLFWLGGCGVLGVGIWLAATQGNFATLSSSFPS---LSAANLLIVTGTFVMAIGFV 165

  Fly    70 GCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQESI----KRSNSEDT 130
            ||.||:||:..||:||.|||.::|::|..:.:....:...::...:..|::.:    .:.|...|
Mouse   166 GCIGALKENKCLLLTFFVLLLLVFLLEATIAVLFFAYSDKIDSYAQQDLKKGLHLYGTQGNVGLT 230

  Fly   131 MAWDNIQQKLMCCGVDSPADWRTLSANKTLPGSCCQPQYIDSTVGHC-LESPALGKDKYFQVGCV 194
            .||..||....||||.:..||..:.....:|.|||. ::.||    | |..|.    .:::..|.
Mouse   231 NAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSCCL-EFSDS----CGLHEPG----TWWKSPCY 286

  Fly   195 GKLKDRIEKNAIILIGV-GIGIAFIQILGIVLA 226
            ..:|..:::| ::.:|: |:..|.:||||:..|
Mouse   287 ETVKAWLQEN-LLAVGIFGLCTALVQILGLTFA 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 70/228 (31%)
tetraspanin_LEL <134..205 CDD:351888 19/71 (27%)
Tspan4NP_001390287.1 Tetraspanin 104..323 CDD:459767 70/228 (31%)
NET-5_like_LEL 200..297 CDD:239418 25/106 (24%)

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