DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and Tsp42Ea

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster


Alignment Length:242 Identity:84/242 - (34%)
Similarity:128/242 - (52%) Gaps:25/242 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SCGPSLIKYVLFAFNVLFAISGLGILIAGAVVLADVNEFNHFVEG-RVLAPPIVLIVTGLIIFLI 66
            |||.|::||:||.||:|.:|.|:.:::.||::.:.|...:.|.|. |....|:.:|:.|.||.||
  Fly     2 SCGISMVKYILFIFNLLCSICGILLIVFGALLFSKVRNMDDFAEALRTQQVPVTMIILGTIILLI 66

  Fly    67 ASLGCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFK-KDLEGM---VKNSLQESIKRSNS 127
            :..||.|||:||..:.:|:::||.|:.|.:||:.|...|.| |.||.|   |:.:......||  
  Fly    67 SWFGCCGAIRESYCMSMTYSILLFVLMIGQLALVIYMWVQKDKYLEIMGDVVEKAWNHRTSRS-- 129

  Fly   128 EDTMAWDNIQQKLMCCGVDSPADWRTLSANKTLPGSCCQPQYIDSTVGHCLESPALGKDKYFQVG 192
             |.|  |.||..:.|||.....|:   :.....|.|||      |...:|      ..:..::.|
  Fly   130 -DYM--DAIQISMKCCGRSGYTDY---AYQGKFPPSCC------SDTNNC------RWETVYRRG 176

  Fly   193 CVGKLKDRIEKNAIILIGVGIGIAFIQILGIVLACYLANSIRQERAK 239
            |.....:..::|:.|:...|:.||.|:.:|.|.||.||||||..|.:
  Fly   177 CKVTFVEFWDRNSDIIKYAGLVIAAIEFVGFVFACCLANSIRNYRRR 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 74/226 (33%)
tetraspanin_LEL <134..205 CDD:351888 15/70 (21%)
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 74/226 (33%)

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