DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and Tsp42Ea

DIOPT Version :9

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster


Alignment Length:242 Identity:84/242 - (34%)
Similarity:128/242 - (52%) Gaps:25/242 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SCGPSLIKYVLFAFNVLFAISGLGILIAGAVVLADVNEFNHFVEG-RVLAPPIVLIVTGLIIFLI 66
            |||.|::||:||.||:|.:|.|:.:::.||::.:.|...:.|.|. |....|:.:|:.|.||.||
  Fly     2 SCGISMVKYILFIFNLLCSICGILLIVFGALLFSKVRNMDDFAEALRTQQVPVTMIILGTIILLI 66

  Fly    67 ASLGCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFK-KDLEGM---VKNSLQESIKRSNS 127
            :..||.|||:||..:.:|:::||.|:.|.:||:.|...|.| |.||.|   |:.:......||  
  Fly    67 SWFGCCGAIRESYCMSMTYSILLFVLMIGQLALVIYMWVQKDKYLEIMGDVVEKAWNHRTSRS-- 129

  Fly   128 EDTMAWDNIQQKLMCCGVDSPADWRTLSANKTLPGSCCQPQYIDSTVGHCLESPALGKDKYFQVG 192
             |.|  |.||..:.|||.....|:   :.....|.|||      |...:|      ..:..::.|
  Fly   130 -DYM--DAIQISMKCCGRSGYTDY---AYQGKFPPSCC------SDTNNC------RWETVYRRG 176

  Fly   193 CVGKLKDRIEKNAIILIGVGIGIAFIQILGIVLACYLANSIRQERAK 239
            |.....:..::|:.|:...|:.||.|:.:|.|.||.||||||..|.:
  Fly   177 CKVTFVEFWDRNSDIIKYAGLVIAAIEFVGFVFACCLANSIRNYRRR 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspannin 9..233 CDD:278750 76/228 (33%)
uroplakin_I_like_LEL 102..205 CDD:239409 26/106 (25%)
Tsp42EaNP_525012.2 Tetraspannin 8..217 CDD:278750 76/228 (33%)
tetraspanin_LEL 104..188 CDD:239401 26/103 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442941
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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