DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp47F and cd81a

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_571593.2 Gene:cd81a / 58031 ZFINID:ZDB-GENE-000831-5 Length:236 Species:Danio rerio


Alignment Length:251 Identity:64/251 - (25%)
Similarity:105/251 - (41%) Gaps:56/251 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IKYVLFAFNVLFAISGLGILIAGAVVLADVNEFNHFVEGRVL---------APP------IVLIV 58
            |||:||.||.:|       .:||.|:|.......|..:...|         :|.      .:||.
Zfish    12 IKYMLFFFNFIF-------WLAGCVILGVSLWLRHDTKTSSLLDLKYEGTESPTTFYISVYILIA 69

  Fly    59 TGLIIFLIASLGCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFK----KDLEGMVKNSLQ 119
            .|.::..:..|||:|||:||..||.||...|.::|..|:|.||...:.|    |::.|.. :|:.
Zfish    70 VGAVMMFVGFLGCYGAIQESQCLLGTFFACLVLLFACEVAAGIWGFMNKDKISKEVIGFY-DSVY 133

  Fly   120 ESIKRSNSED----TMAWDNIQQKLMCCGVDSPADWRTLSANKTLPGSCCQPQYIDSTVGHCLES 180
            :.....|:::    |.......:.|.|||   ..:..|...::.|..:|  |:::.:..      
Zfish   134 DKGATYNTDNKNPATAVLKVFHETLQCCG---KGNLFTAIVDRWLTDTC--PEHLRTNA------ 187

  Fly   181 PALGKDKYFQVGCVGKLK----DRIEKNAIILIGVGIGIAFIQILGIVLACYLANS 232
                      |.|..::|    |:|....|..:.|.:.:.|..|..:||.|.:.||
Zfish   188 ----------VDCHTEIKNLFTDKISLIGIAALVVAVIMIFEMIFSMVLCCGIRNS 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 62/248 (25%)
tetraspanin_LEL <134..205 CDD:351888 13/74 (18%)
cd81aNP_571593.2 Tetraspanin 12..228 CDD:459767 61/244 (25%)

Return to query results.
Submit another query.