DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp47F and tspan9a

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:XP_073785985.1 Gene:tspan9a / 555341 ZFINID:ZDB-GENE-060503-632 Length:336 Species:Danio rerio


Alignment Length:236 Identity:67/236 - (28%)
Similarity:116/236 - (49%) Gaps:13/236 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IKYVLFAFNVLFAISGLGILIAGAVVLADVNEFNHFVEG-RVLAPPIVLIVTGLIIFLIASLGCF 72
            :||::|.||::|.:.|.|:|..|..:......|..|... ..|:...::|..|.|:.:...|||.
Zfish   106 LKYMMFVFNLIFWLCGCGLLGVGIWLSVSQGSFATFSPSFPSLSAANMVIAIGAIVMVTGFLGCL 170

  Fly    73 GAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQESIKRSNSEDTM----AW 133
            |||||:..||::|.::|.:|.:.||.:.|...|:...:....|..|::.:...|:::.:    ||
Zfish   171 GAIKENKCLLLSFFIVLLIILLAELILLILFFVYSDKVSENAKQDLKDGLALYNTDNNIGLRNAW 235

  Fly   134 DNIQQKLMCCGVDSPADWRTLSANKTLPGSCCQPQYIDSTVGHCLESPALGKDKYFQVGCVGKLK 198
            :.||.:..||||....||......|.:|..|||..|        .|......:.::..||..|::
Zfish   236 NIIQAEWKCCGVTGYTDWHDALKEKVVPDRCCQEHY--------QECGRNSTNMFWTRGCYEKVE 292

  Fly   199 DRIEKNAIILIGVGIGIAFIQILGIVLACYLANSIRQERAK 239
            :.:|.|..:|..:|:.|..:|:||:..:..|.:.|.:...|
Zfish   293 EWLEDNKHLLGTIGMCILVVQLLGMAFSMTLFHQIHRSGKK 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 65/226 (29%)
tetraspanin_LEL <134..205 CDD:351888 19/70 (27%)
tspan9aXP_073785985.1 None

Return to query results.
Submit another query.