DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and cd63

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_001016413.1 Gene:cd63 / 549167 XenbaseID:XB-GENE-1015227 Length:238 Species:Xenopus tropicalis


Alignment Length:235 Identity:83/235 - (35%)
Similarity:126/235 - (53%) Gaps:13/235 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GPSLIKYVLFAFNVLFAISGLGILIAGAVVLADVNEFNHFVEGRVLAPPIVLIVTGLIIFLIASL 69
            |...:|:::|.||.:|.:.|:.::..|..|...:|.............|||:||.|::|||||..
 Frog     6 GMKCVKFLMFFFNFVFWVCGIALIAIGIYVQIQLNHTLIMKNATSSGAPIVIIVVGVVIFLIAFF 70

  Fly    70 GCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQESIKRSNSEDTMA-- 132
            ||.||:||:..::.||||:|.:||:||:|..|||.|:|..|....::|.:..:...|....:|  
 Frog    71 GCCGALKENYCMVTTFAVVLVLIFLVEIAAAIAAYVYKDKLRTAFEDSFKNGMVHYNDTKDIADS 135

  Fly   133 WDNIQQKLMCCGVDSPADWR---TLSANKTLPGSCCQPQYIDSTVGHCLESPALGKDKYFQVGCV 194
            .|.:|::..|||..:..|||   ..:...|:|.|||:    :.|.| |.:.|....:   ..||.
 Frog   136 IDLLQKEFQCCGAINSTDWRQYAPFTGTNTVPDSCCK----NITAG-CGKGPIANIN---SEGCA 192

  Fly   195 GKLKDRIEKNAIILIGVGIGIAFIQILGIVLACYLANSIR 234
            ..:...::||..|:.||.:|||..:|||||.||.|...||
 Frog   193 TGIDQWVKKNVGIVAGVALGIALFEILGIVFACCLMKGIR 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 80/226 (35%)
tetraspanin_LEL <134..205 CDD:351888 20/73 (27%)
cd63NP_001016413.1 Tetraspanin 22..227 CDD:459767 74/212 (35%)
tetraspanin_LEL 105..203 CDD:351888 26/105 (25%)

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