DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and tspan5a

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:XP_068078345.1 Gene:tspan5a / 450026 ZFINID:ZDB-GENE-041010-145 Length:301 Species:Danio rerio


Alignment Length:267 Identity:77/267 - (28%)
Similarity:126/267 - (47%) Gaps:43/267 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SCGPSLIKYVLFAFNVLF-----AISGLGI-------LIAGAVVLADVNEFNHFVEGRVLAPPIV 55
            ||   .|||.:|.||::|     |..|:|:       :::....:.|:..|:         |..:
Zfish    26 SC---CIKYFIFGFNIIFWLLGVAFLGIGLWAWSEKGVLSNISSITDLGGFD---------PVWL 78

  Fly    56 LIVTGLIIFLIASLGCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQE 120
            .:|.|.::|::...||.||::|:..||..|:|.|.:||.:||..||.|.|||..::..:...:..
Zfish    79 FLVVGGVMFILGFAGCIGALRENTFLLKFFSVFLGIIFFLELTAGILAFVFKDWIKDQLNFFINN 143

  Fly   121 SIK--RSNSEDTMAWDNIQQKLMCCGVDSPADWR-TLSANKT----------LPGSCC----QPQ 168
            :|:  |.:.:.....|..|:...|||.....||. .:..|.|          :|.|||    ...
Zfish   144 NIRAYRDDIDLQNLIDFTQEYWECCGAFGADDWNLNIYFNCTDSNPSREKCGVPFSCCTKDPAED 208

  Fly   169 YIDSTVGHCLES-PALGKDKYFQV-GCVGKLKDRIEKNAIILIGVGIGIAFIQILGIVLACYLAN 231
            .|::..|:.:.: |...:..|..| |||.:.:..::.|..::.|:.||||.:||.||.||..|.:
Zfish   209 VINTQCGYDVRAKPDAEQKTYIHVKGCVPQFEKWLQDNLTVVAGIFIGIALLQIFGICLAQNLVS 273

  Fly   232 SIRQERA 238
            .|...||
Zfish   274 DIEAVRA 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 72/252 (29%)
tetraspanin_LEL <134..205 CDD:351888 21/87 (24%)
tspan5aXP_068078345.1 Tetraspanin 29..272 CDD:459767 71/251 (28%)
TM4SF9_like_LEL 127..247 CDD:239412 26/119 (22%)

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