DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and tspan7

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_001124290.1 Gene:tspan7 / 449539 ZFINID:ZDB-GENE-040927-5 Length:249 Species:Danio rerio


Alignment Length:241 Identity:75/241 - (31%)
Similarity:122/241 - (50%) Gaps:25/241 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KYVLFAFNVLFAISGLGILIAGAVVLADVNEFNHFVEGRVLA--------PPIVLIVTGLIIFLI 66
            |.|:.....|..:......|.||::|| |..:..|:.|..::        .|.|||.||..|.:.
Zfish     9 KPVITCLKTLLIVYSFVFWITGAILLA-VGLWGKFILGPYISLIAENSTNAPYVLIGTGTTIIVF 72

  Fly    67 ASLGCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQESIKRSNSED-- 129
            ...|||...:.||.:|..:|:.|:::|:.||..||:..||:.:::|....:..|:::..|::|  
Zfish    73 GLFGCFATCRGSPWMLKLYAMFLSLVFLAELVAGISGFVFRHEIKGTFLRTYNEAVQNYNAQDER 137

  Fly   130 TMAWDNIQQKLMCCGVDSPADWRT---LSANKTLPGSCCQPQYIDSTVGHC----LESPALGKDK 187
            ::|.||:|:.|.||||.:...|.:   ...| .:|.|||      :.:..|    |.:..:...|
Zfish   138 SIAVDNVQRSLRCCGVLNYTSWFSSVYFPVN-GIPPSCC------ANISDCNASDLRNATIAPTK 195

  Fly   188 YFQVGCVGKLKDRIEKNAIILIGVGIGIAFIQILGIVLACYLANSI 233
            .:|.||...:...||.|..|:.||..||||.|::|::|||.|:..|
Zfish   196 VYQQGCYELVTTFIETNMGIIAGVTFGIAFSQLIGMLLACCLSRFI 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 74/237 (31%)
tetraspanin_LEL <134..205 CDD:351888 22/77 (29%)
tspan7NP_001124290.1 Tetraspanin 15..239 CDD:459767 72/231 (31%)
TM4SF2_6_like_LEL 110..213 CDD:239414 29/109 (27%)

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