DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and TSPAN11

DIOPT Version :9

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:XP_011518981.1 Gene:TSPAN11 / 441631 HGNCID:30795 Length:302 Species:Homo sapiens


Alignment Length:234 Identity:68/234 - (29%)
Similarity:113/234 - (48%) Gaps:20/234 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IKYVLFAFNVLFAISGLGILIAGAVVLADVNEF-NHFVEGRVLAPPIVLIVTGLIIFLIASLGCF 72
            :||:||.||..|.:.|..:|..|...|.:.:.: :........|...:||..|:::.:...|| |
Human    16 LKYLLFVFNFFFWVGGAAVLAVGIWTLVEKSGYLSVLASSTFAASAYILIFAGVLVMVTGFLG-F 79

  Fly    73 GAIK-ESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQESIKRSNSED-----TM 131
            |||. |....|.|:..||.|||:|||..|:.|.|:.:.|...:|..|..::..:..:.     |.
Human    80 GAILWERKGCLSTYFCLLLVIFLVELVAGVLAHVYYQRLSDELKQHLNRTLAENYGQPGATQITA 144

  Fly   132 AWDNIQQKLMCCGVDSPADWR-------TLSANKTLPGSCCQPQYIDSTVGHCLESPALGKDKYF 189
            :.|.:||...|||.:|.|||:       ..:..:.:|.|||:     :.|..|.:..........
Human   145 SVDRLQQDFKCCGSNSSADWQHSTYILLREAEGRQVPDSCCK-----TVVVRCGQRAHPSNIYKV 204

  Fly   190 QVGCVGKLKDRIEKNAIILIGVGIGIAFIQILGIVLACY 228
            :.||:.||:..:..:.:::..||||:|.:||...|:|.:
Human   205 EGGCLTKLEQFLADHLLLMGAVGIGVACLQITEDVIATH 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspannin 9..233 CDD:278750 68/234 (29%)
uroplakin_I_like_LEL 102..205 CDD:239409 26/114 (23%)
TSPAN11XP_011518981.1 Tetraspannin 16..235 CDD:278750 64/224 (29%)
PHA03242 <50..>118 CDD:177566 24/68 (35%)
CD151_like_LEL 112..220 CDD:239408 25/112 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4418
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.840

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