DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and tspan4a

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:XP_073785120.1 Gene:tspan4a / 436620 ZFINID:ZDB-GENE-040718-38 Length:321 Species:Danio rerio


Alignment Length:227 Identity:67/227 - (29%)
Similarity:116/227 - (51%) Gaps:21/227 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IKYVLFAFNVLFAISGLGILIAGAVVLADVNEFNHFVEGRVLAPPI----VLIVTGLIIFLIASL 69
            ::|.:..||:||.:.|.|||  |..|...:.:.| |.......|.:    :||..|.::.:|..|
Zfish    91 LRYGMVFFNLLFWLCGCGIL--GVGVWLSITQGN-FATLSSSLPSLSAANLLIAAGTVVMVIGCL 152

  Fly    70 GCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQESIKRSNSED----T 130
            ||.||:||:..||::|.:||.:||::|:...|....::..::...:|.|::.::...:|.    |
Zfish   153 GCVGAVKENRPLLLSFFILLLLIFLLEILFIILFFSYQDQIDLYAQNDLKKGLQLFGTEGNIGLT 217

  Fly   131 MAWDNIQQKLMCCGVDSPADWRTLSANKTLPGSCCQPQYIDSTVGHC-LESPALGKDKYFQVGCV 194
            .||..:|....||||.:..||..:.....:|.|||. :|.|    :| ||:|.    .::...|.
Zfish   218 NAWSIVQTDFRCCGVTNHTDWFQVYNTSRVPDSCCL-EYSD----NCGLENPG----TWWTAPCY 273

  Fly   195 GKLKDRIEKNAIILIGVGIGIAFIQILGIVLA 226
            .::|..:::|.:.|....:..|..||||:|.:
Zfish   274 ERVKGWLQENLVALWIFALCTALTQILGLVFS 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 67/227 (30%)
tetraspanin_LEL <134..205 CDD:351888 19/71 (27%)
tspan4aXP_073785120.1 None

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