DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and tspan9b

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:XP_068075684.1 Gene:tspan9b / 431733 ZFINID:ZDB-GENE-040704-25 Length:337 Species:Danio rerio


Alignment Length:239 Identity:66/239 - (27%)
Similarity:121/239 - (50%) Gaps:19/239 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IKYVLFAFNVLFAISGLGILIAGAVVLADVNEFNHFVEG-RVLAPPIVLIVTGLIIFLIASLGCF 72
            :||::|.||:||.:||.|:|..|..:......|..|... ..|:...::|..|.::.:...|||.
Zfish   107 VKYMMFLFNLLFWLSGCGLLGVGIWLSVSQGSFATFSPSFPSLSAANLVITLGSVVMVTGFLGCL 171

  Fly    73 GAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQESIKRSNSEDTM----AW 133
            |||||:..||::|.::|.:|.:.||.:.|...|:.:.:....|..|::.::..|:::.:    ||
Zfish   172 GAIKENKCLLLSFFIVLLIILLAELILLILFFVYTEKVSENAKQDLKDGLRLYNTDNNVGLRNAW 236

  Fly   134 DNIQQKLMCCGVDSPADWRTLSANKTLPGSCCQPQYIDSTVGHCLESPALGKDK---YFQVGCVG 195
            :.||.:..||||...:||......|::|..|||..|.:     |      |::.   ::..||..
Zfish   237 NIIQAEWQCCGVTGLSDWHEALQEKSVPDRCCQEHYTE-----C------GRNTTNVFWSQGCYE 290

  Fly   196 KLKDRIEKNAIILIGVGIGIAFIQILGIVLACYLANSIRQERAK 239
            |:::.:..|..:|..:.:.:..:|:||:..:..|...|.:...|
Zfish   291 KVEEWLNDNKHLLGTIAMCVLVLQLLGMAFSMTLYQQIHRAGKK 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 64/229 (28%)
tetraspanin_LEL <134..205 CDD:351888 19/73 (26%)
tspan9bXP_068075684.1 Tetraspanin 107..326 CDD:459767 64/229 (28%)
NET-5_like_LEL 203..300 CDD:239418 25/107 (23%)

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