DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and Tsp86D

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_001262468.1 Gene:Tsp86D / 41310 FlyBaseID:FBgn0037848 Length:316 Species:Drosophila melanogaster


Alignment Length:269 Identity:71/269 - (26%)
Similarity:129/269 - (47%) Gaps:44/269 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SLIKYVLFAFNVLFAISGLGILIAGAVV-----LADVNEFNHF--VEGRVLAPPIVLIVTGLIIF 64
            |.:||::|..|.||.:.| |:|:|..|.     |.|.|.:...  :...:....:|:|:.|:|:|
  Fly    29 SCVKYMIFLLNFLFWLFG-GLLLAIGVYAFMDKLMDGNGWLRLDTIYDVIFNISLVMIIAGVIVF 92

  Fly    65 LIASLGCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQESIKRSNSED 129
            .::..||.||::|:..||..:::.|.:.||:|:::.|...||.:.:...::....:.|..|..:|
  Fly    93 TVSFAGCLGALRENTWLLKLYSMCLLLFFILEMSLAIICFVFPQYMNSFLEYQFTDKIIHSYRDD 157

  Fly   130 TMAW---DNIQQKLMCCGVDSPA--DWRTLSANK------------TLPGSCCQPQYIDST---- 173
            :...   |..||:..|||:.:..  ||   |.|:            .:|.|||    |::|    
  Fly   158 SDLQNFIDFAQQEFNCCGLSNAGYQDW---SKNEYFNCSSPSVERCGVPYSCC----INATDISS 215

  Fly   174 --------VGHCLESPALGKDKYFQVGCVGKLKDRIEKNAIILIGVGIGIAFIQILGIVLACYLA 230
                    .|..:.|.|....:.:..||:..::..:|:|..::.||.:|||.:|:..|.||..|.
  Fly   216 GLVNIMCGYGVQVRSVAAASKRIWTSGCIEIVRVWVERNLYVIAGVALGIALLQLFVIYLAKTLE 280

  Fly   231 NSIRQERAK 239
            ..|..::::
  Fly   281 GQIDLQKSR 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 69/257 (27%)
tetraspanin_LEL <134..205 CDD:351888 22/96 (23%)
Tsp86DNP_001262468.1 Tetraspanin 51..279 CDD:459767 59/234 (25%)
penumbra_like_LEL 132..255 CDD:239411 27/129 (21%)

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