DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and cd81

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_989271.1 Gene:cd81 / 394885 XenbaseID:XB-GENE-946220 Length:237 Species:Xenopus tropicalis


Alignment Length:243 Identity:61/243 - (25%)
Similarity:105/243 - (43%) Gaps:37/243 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IKYVLFAFNVLFAISGLGILIAGAVVLADVNE-----FNHFVE----GRVLAPPIVLIVTGLIIF 64
            |||:||.||.:|.::| |:::..|:.|....:     |..|.:    |.......::|..|.::.
 Frog    10 IKYLLFVFNFIFWLAG-GVILGVALWLRHDPQTSNLLFQQFEDKHAPGTFYIGVYIIIAVGAVMM 73

  Fly    65 LIASLGCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASV----FKKDLEGMVKNSLQESIKRS 125
            .:..|||:|||:||..||.||...|.::|..|:|.||...|    ..|::........|.:...:
 Frog    74 FVGFLGCYGAIQESQCLLGTFFACLVILFACEVAAGIWGFVNRDQVSKEMRLFYSEVYQHATTGT 138

  Fly   126 NSEDTMAWDNIQ---QKLMCCGVDSPADWRTLSANKTLPGSCCQPQYIDSTVGHCLESPALGKDK 187
            ..:...|...::   :.|.|||..|...:.|:|.....|..           .:.||...: :| 
 Frog   139 KEQQQKALPVLKAFHETLQCCGDASLKKYVTMSITDMCPKR-----------SNILEQITI-ED- 190

  Fly   188 YFQVGCVGKLKDRIEKNAIILIGV-GIGIAFIQILGIVLACYLANSIR 234
                 |..|: |.:....:.|:|: .:.:|.|.|:.::.:..|...||
 Frog   191 -----CHQKI-DVLFSTKLYLVGIAAVVVAVIMIIEMIFSMVLCCGIR 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 59/238 (25%)
tetraspanin_LEL <134..205 CDD:351888 14/73 (19%)
cd81NP_989271.1 Tetraspanin 10..229 CDD:459767 59/238 (25%)

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