DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and tspan34b

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_956702.2 Gene:tspan34b / 393380 ZFINID:ZDB-GENE-040426-1362 Length:243 Species:Danio rerio


Alignment Length:252 Identity:73/252 - (28%)
Similarity:121/252 - (48%) Gaps:46/252 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IKYVLFAFNVLFAISGLGILIAGAVVLADVNEFNHFVE---------GRVLAPPIVLIVTGLIIF 64
            :|.::|.||.:..::|..||..|..|..|.....:|::         |:||....:||..|.::.
Zfish     7 LKTMMFLFNGIIFLAGGVILGVGIWVKVDNGSILNFMQSLPGASSQMGQVLNVGYLLIALGAVLV 71

  Fly    65 LIASLGCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVK-------NSLQESI 122
            ::..|||.||||||..:|:.|.:::.:|||.|:|..|....|:...|.::|       .|||...
Zfish    72 VLGFLGCCGAIKESRCMLMLFFIIILIIFIAEVAGAIVILAFRPLAETLIKQLGVDAVKSLQSDF 136

  Fly   123 KRSNSEDTMAWDNIQQKLMCCGVDSPADWRT---LSANKTLPGSCC------QPQYIDSTVGHCL 178
            .: |.:.|..|:.....:.|||.::..|:..   :::.|..|..||      |...::|||..|.
Zfish   137 GK-NPDVTGLWNTTMTGMKCCGFNNYTDFTNSFFVNSTKNYPVQCCNTSPCNQAAVMNSTVTGCF 200

  Fly   179 ESPALGKDKYFQVGCVGKLKDRIEKNAIILIGVGIGIAFIQ----ILGIVLACYLAN 231
              |||.|              .::|||:|:|.|.:|||.::    |:.:||.|.:.:
Zfish   201 --PALIK--------------LVDKNAVIIIAVALGIAALELAAMIVSMVLYCKIGS 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 73/250 (29%)
tetraspanin_LEL <134..205 CDD:351888 18/79 (23%)
tspan34bNP_956702.2 Tetraspanin 7..237 CDD:459767 72/246 (29%)
tetraspanin_LEL <139..211 CDD:351888 21/87 (24%)

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