DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and zgc:64051

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_956665.1 Gene:zgc:64051 / 393342 ZFINID:ZDB-GENE-040426-1349 Length:221 Species:Danio rerio


Alignment Length:236 Identity:65/236 - (27%)
Similarity:109/236 - (46%) Gaps:38/236 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IKYVLFAFNVLFAISGLGILIAGAVVLADVNEFNHFVEGRVLAPPIVLIVTGLIIFLIASLGCFG 73
            :||::...|.:|.|.|..|...| :.|...:..:.....:.::....|.:||:||..::.||..|
Zfish     7 LKYIMCVVNFIFFICGAAIFGMG-IYLMTFSRLSLLPSLQAMSIANTLFITGIIITCVSFLGFLG 70

  Fly    74 AIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVK----NSLQESIK-RSNSEDTMAW 133
            |:||:..|||:|.:||.::.:.|||......:::..:|..:|    :.|.:||| |.....|..|
Zfish    71 ALKENRCLLISFFILLFILMLAELAAACLMLMYESKIENFIKDDLVDGLNQSIKNRKQHNTTDDW 135

  Fly   134 DNIQQKLMCCGVDSPADWRTLSANKTLPGSCCQPQYIDSTVGHCLESPALGKDKYFQVGCVGKLK 198
            |.:|:...|||:.:..||:..     :|.||    .|..|             ..:..||...|:
Zfish   136 DKVQETFGCCGIQNATDWQGF-----VPQSC----NISGT-------------SNWHKGCFKLLE 178

  Fly   199 DRIEKNAIILIGVGIG---IAFIQILG----IVLACYLANS 232
            :..|.|   |:..|||   :..|::||    :.|.|::..|
Zfish   179 NSFESN---LLSTGIGVIVVCIIEVLGMCFSMTLFCHINRS 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 64/233 (27%)
tetraspanin_LEL <134..205 CDD:351888 16/70 (23%)
zgc:64051NP_956665.1 Tetraspanin 7..211 CDD:459767 63/229 (28%)
CD53_like_LEL 101..189 CDD:239417 27/112 (24%)

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