DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and tspan2a

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_001018160.1 Gene:tspan2a / 378854 ZFINID:ZDB-GENE-050522-511 Length:211 Species:Danio rerio


Alignment Length:235 Identity:66/235 - (28%)
Similarity:103/235 - (43%) Gaps:43/235 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IKYVLFAFNVLFAISGLGILIAGAVVLADVNEFNHFVEGRVLAPP------IVLIVTGLIIFLIA 67
            :||:||.||.:|.:||..:|..|..:..|.:..:...|..  ||.      .:||..|.|:.::.
Zfish    11 VKYLLFVFNFIFWLSGSLVLAVGLWLRFDPDTTSLLSEND--APENFFIAVYILIGAGGIMMIVG 73

  Fly    68 SLGCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQESIKRSNSEDTMA 132
            ..|||||::||..||.:|...|.:||..|:|.|:...:.|..:...|:|..:.:.|..|.  |:.
Zfish    74 FFGCFGAVRESQCLLGSFFACLLLIFGAEVAAGVFGFLNKDQIIKEVQNYYESATKMENG--TVI 136

  Fly   133 WDNIQQKLMCCGVDSPADWRTLSANKTLPGSCCQPQYIDSTVGHCLESPALGKDKYFQVGCVGKL 197
            .......|.|||.:|                        |.:..|.|.   .||      ||..:
Zfish   137 TSAFHSVLDCCGTES------------------------SPIETCTEG---NKD------CVQAI 168

  Fly   198 KDRIEKNAIILIGVGIGIAFIQILGIVLACYLANSIRQER 237
            :|...:...|:..||||||.:.::|::.:..|..:||..|
Zfish   169 EDFFNEKLFIIGYVGIGIAGVMVIGMIFSMVLCCAIRNSR 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 63/227 (28%)
tetraspanin_LEL <134..205 CDD:351888 13/70 (19%)
tspan2aNP_001018160.1 Tetraspanin 11..202 CDD:459767 63/227 (28%)

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