DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and TM4SF

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_001261159.1 Gene:TM4SF / 37786 FlyBaseID:FBgn0020372 Length:292 Species:Drosophila melanogaster


Alignment Length:229 Identity:63/229 - (27%)
Similarity:114/229 - (49%) Gaps:24/229 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KYVLFAFNVLFAISGLGILIAGAVVLADVNEFNHFVEGRVLAPPIVLIVTGLIIFLIASLGCFGA 74
            ||:::::.||.|::|...:..|..:|...:.:...|:.::.||..:|:..|.:.|::..:||...
  Fly    11 KYLVYSYVVLLALTGAAQIFLGTSLLWGHSVYYGIVQNKLWAPAAILLCLGPVTFILCWMGCQAT 75

  Fly    75 IKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQES-------IKRSNSEDTMA 132
            .:....||..||.||.....|:..:...:...:::|...|:..:.:|       ..|:..::...
  Fly    76 NQRKRCLLGMFAALLVACICVQFIICGWSLAMRENLPTSVEIFIDDSFVEFLDKFSRTKVDNLHL 140

  Fly   133 WDNIQQKLMCCGVDSPADWRTLSANKTLPGSCC-QPQYIDSTVGHCLESPALGKDKYFQVGCVGK 196
            |:.:|.:|.|||||.|.|:|.||    ||.||| :|:       |..||..   |.:::.||:..
  Fly   141 WNRMQSQLQCCGVDGPLDYRRLS----LPWSCCSRPE-------HAYESAC---DTHYKRGCLAV 191

  Fly   197 LKDRIEKNAIILIGVGIG-IAFIQILGIVLACYL 229
            :.::| :|.:::...|.. ||..|.|||..|.:|
  Fly   192 VSEQI-RNRLLITAFGAAIIAIFQSLGIFCAVHL 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 63/229 (28%)
tetraspanin_LEL <134..205 CDD:351888 25/71 (35%)
TM4SFNP_001261159.1 Tetraspanin 10..224 CDD:459767 62/227 (27%)

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