DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and Tsp42Er

DIOPT Version :9

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_523644.1 Gene:Tsp42Er / 35629 FlyBaseID:FBgn0033139 Length:211 Species:Drosophila melanogaster


Alignment Length:235 Identity:61/235 - (25%)
Similarity:107/235 - (45%) Gaps:38/235 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 PSLIKYVLFAFNVLFAISGLGILIAGAVVLADVNEFNHFVEGRVLAPPIVLIVTGLIIFLIASLG 70
            |.:|:|:.|.||.|.|:.|:..::...:.:..:...:..:.|       :.|..|.|:||::..|
  Fly     5 PLMIRYLAFLFNFLCAVLGIATIVVNVIAIDQIAPKDQLILG-------LYIAVGSIVFLLSFFG 62

  Fly    71 CFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQESI-KRSNSEDTMAWD 134
            ||||||||..:...:|..:.|:.||.:   :...||:...|......|:::. |::|:.|.||  
  Fly    63 CFGAIKESICVTWAYATSMLVMLIVSI---VMLFVFRMHFEEDSITKLKQAFAKQTNTFDAMA-- 122

  Fly   135 NIQQKLMCCGVDSPADWRTLSANKTLPGSCCQPQYIDSTVGHCLESPALGKDKYFQVGCVGKLKD 199
            ..|.:..|||:....|:.  .|..|:|.||...                 .|..::.||:.|::.
  Fly   123 EYQTQYQCCGIYKLKDYG--DAYITVPSSCYDQ-----------------NDTPYRDGCLAKMET 168

  Fly   200 RIEKNAIILIG---VGIGIAFIQILGIVLACYLANSIRQE 236
            :.|:   :|.|   ||..:..|:|.....:..:..|:|.|
  Fly   169 QYEE---LLKGPKIVGWMLMVIEIGAFTFSTIMGVSLRNE 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspannin 9..233 CDD:278750 57/227 (25%)
uroplakin_I_like_LEL 102..205 CDD:239409 24/103 (23%)
Tsp42ErNP_523644.1 Tetraspannin 8..195 CDD:278750 57/220 (26%)
tetraspanin_LEL 93..174 CDD:239401 24/104 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442936
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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