DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and Tsp42Er

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_523644.1 Gene:Tsp42Er / 35629 FlyBaseID:FBgn0033139 Length:211 Species:Drosophila melanogaster


Alignment Length:235 Identity:61/235 - (25%)
Similarity:107/235 - (45%) Gaps:38/235 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 PSLIKYVLFAFNVLFAISGLGILIAGAVVLADVNEFNHFVEGRVLAPPIVLIVTGLIIFLIASLG 70
            |.:|:|:.|.||.|.|:.|:..::...:.:..:...:..:.|       :.|..|.|:||::..|
  Fly     5 PLMIRYLAFLFNFLCAVLGIATIVVNVIAIDQIAPKDQLILG-------LYIAVGSIVFLLSFFG 62

  Fly    71 CFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQESI-KRSNSEDTMAWD 134
            ||||||||..:...:|..:.|:.||.:   :...||:...|......|:::. |::|:.|.||  
  Fly    63 CFGAIKESICVTWAYATSMLVMLIVSI---VMLFVFRMHFEEDSITKLKQAFAKQTNTFDAMA-- 122

  Fly   135 NIQQKLMCCGVDSPADWRTLSANKTLPGSCCQPQYIDSTVGHCLESPALGKDKYFQVGCVGKLKD 199
            ..|.:..|||:....|:.  .|..|:|.||...                 .|..::.||:.|::.
  Fly   123 EYQTQYQCCGIYKLKDYG--DAYITVPSSCYDQ-----------------NDTPYRDGCLAKMET 168

  Fly   200 RIEKNAIILIG---VGIGIAFIQILGIVLACYLANSIRQE 236
            :.|:   :|.|   ||..:..|:|.....:..:..|:|.|
  Fly   169 QYEE---LLKGPKIVGWMLMVIEIGAFTFSTIMGVSLRNE 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 57/225 (25%)
tetraspanin_LEL <134..205 CDD:351888 15/70 (21%)
Tsp42ErNP_523644.1 Tetraspanin 8..195 CDD:459767 57/220 (26%)

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