DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and Tsp42En

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_523640.1 Gene:Tsp42En / 35624 FlyBaseID:FBgn0033135 Length:218 Species:Drosophila melanogaster


Alignment Length:259 Identity:54/259 - (20%)
Similarity:107/259 - (41%) Gaps:69/259 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 CGPSLIKYVLFAFNVLFAISGLGILIAGAVVLADVNE-----FNHFVEGRVLAPPIVLIVTGLII 63
            |..|.:|.||...|||.::.|:.::   |:.:.::|.     |.|..       .:|.|..|..:
  Fly     3 CRTSFLKAVLIVLNVLLSLIGVTLI---ALSVYELNSSTPGTFEHIA-------IVVQIFVGTFV 57

  Fly    64 FLIASLGCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQESIKRSNSE 128
            .|.:.||||...:.|..|:.::.:.|.::..:::.: |||:            ...:.::||..:
  Fly    58 VLTSFLGCFATARVSLGLVWSYVICLLILLCLQIYI-IAAA------------HSTDYVERSKKD 109

  Fly   129 DTMAWDN----------IQQKLMCCGVDSPADWRTLSANKTLPGSCCQPQYIDSTVGHCLESPAL 183
            ....|.:          ::||..|||.....|:  :...:.:|.||.:.|               
  Fly   110 FLATWADQRTNVERISLLEQKYSCCGQLGAHDY--ILMGRGIPLSCYKDQ--------------- 157

  Fly   184 GKDKY--FQVGCVGKLKDRIEKNAIILIGVGIGIAFIQIL----GIVLACYLA----NSIRQER 237
            .:.:|  |..||:    ..::.:|...:.:|:.|.::.:|    .:..|.:|.    |.:|:||
  Fly   158 ERREYSLFSGGCL----QAVQAHATDNVAIGLIIKWLLLLVEFAALGAATHLGITVRNKLRRER 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 48/246 (20%)
tetraspanin_LEL <134..205 CDD:351888 14/82 (17%)
Tsp42EnNP_523640.1 Tetraspanin 8..>135 CDD:459767 31/149 (21%)
tetraspanin_LEL 96..180 CDD:239401 19/116 (16%)

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