DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and Tsp42Eh

DIOPT Version :9

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster


Alignment Length:255 Identity:63/255 - (24%)
Similarity:106/255 - (41%) Gaps:54/255 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 CGPSLIKYVLFAFNVLFAISGLGILIAGAVVLADVNEFNHFV---EGRVLAPPIVLIVTGLIIFL 65
            |...|::|||...:.:.|:.|..::..||.:|..::|....:   .|..|| .::.::.|.:|.:
  Fly     3 CTTRLLRYVLCVISGICALGGCLLIWYGAWLLDSLSEEQRMLGMDHGEDLA-AVLCVLLGTVIVV 66

  Fly    66 IASLGCFGAIKESPTLLITFAVLLAVIFIVEL---AVGIAASVFKKDLEGMVKNSLQESIKRSNS 127
            .:..|.....|:|..|||.:||||..:.||::   ::..|||          ::.|.:|:::...
  Fly    67 ASIFGSVAVAKDSRVLLICYAVLLVFLLIVQIVLVSISYAAS----------RDFLPDSLRQGLD 121

  Fly   128 EDTMAWD----------NIQQKLMCCGVDSPADWRTLSANKTLPGSCCQPQYIDSTVGHCLESPA 182
            :   .||          ..::.|.|||.:|..|:  |...|..|.|||                 
  Fly   122 D---LWDLQHEGNSTLNTYEEWLHCCGRNSAEDY--LHLEKMPPPSCC----------------- 164

  Fly   183 LGKD-----KYFQVGCVGKLKDRIEKNAIILIGVGIGIAFIQILGIVLACYLANSIRQER 237
            |.:|     ..|..||..|.|:.:.........:...:...:..|.|..|||.:|||..|
  Fly   165 LNRDCTKHLNLFMTGCEVKFKEYVGAKTANFHSLSWFLVIFEFAGSVTTCYLVDSIRNHR 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspannin 9..233 CDD:278750 57/244 (23%)
uroplakin_I_like_LEL 102..205 CDD:239409 26/117 (22%)
Tsp42EhNP_523634.1 Tetraspannin 8..220 CDD:278750 57/244 (23%)
tetraspanin_LEL 109..192 CDD:239401 23/104 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442943
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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