DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and Tsp42Ec

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_523629.1 Gene:Tsp42Ec / 35612 FlyBaseID:FBgn0033124 Length:232 Species:Drosophila melanogaster


Alignment Length:242 Identity:60/242 - (24%)
Similarity:123/242 - (50%) Gaps:25/242 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 CGPSLIKYVLFAFNVLFAISGLGILIAGAVVLADVNEFNHFVEGRVLAP---PIVLIVTGLIIFL 65
            |...::.::|:..|::|.|.|:.:::.|:::|:|::.|:  |.|....|   ||.:.|.|.:||:
  Fly     3 CLSGIVNFILYIVNIVFLIVGILLIVLGSIMLSDLSRFD--VAGSGTDPNTIPICVTVLGGLIFV 65

  Fly    66 IASLGCFGAIKESPTLLITFAVLLAVIFIVELA----VGIAASVFKKDLEGMVKNSLQESIKRSN 126
            ::..||:|..::|..:...:..::.|:||::|.    |.:..|.|..|:..:| |.|.:      
  Fly    66 VSFFGCYGIFRQSVCMTGAYTSMVFVLFILQLVLTCWVFVNRSAFLGDMSNLV-NLLWD------ 123

  Fly   127 SEDTMAWDNIQQKLMCCGVDSPADWRTLSANKTLPGSCCQPQYIDSTVGHCLESPALGKDKYFQV 191
            |.|..|...:::...|||..|..::..:..  ::||:||  .|:|...  ...:|::.:.:   .
  Fly   124 SHDYTAMGVLEETFGCCGDTSYTNYNNIGL--SVPGTCC--GYLDRQA--TCNTPSVYQSR---P 179

  Fly   192 GCVGKLKDRIEKNAIILIGVGIGIAFIQILGIVLACYLANSIRQERA 238
            ||..|.::....|..|:...|:|:....::..::|..|.|.:|.:.|
  Fly   180 GCSAKFEEFWNDNMDIIRWSGLGLCIFDLVVFLIAGALTNCMRSQNA 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 56/228 (25%)
tetraspanin_LEL <134..205 CDD:351888 14/70 (20%)
Tsp42EcNP_523629.1 Tetraspanin 8..219 CDD:459767 56/228 (25%)
tetraspanin_LEL <137..192 CDD:351888 14/63 (22%)

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