DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and Tsp29Fa

DIOPT Version :9

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_001162915.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster


Alignment Length:232 Identity:88/232 - (37%)
Similarity:132/232 - (56%) Gaps:9/232 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IKYVLFAFNVLFAISGLGILIAGAVVLADVNEFNHFVEGRVLAPPIVLIVTGLIIFLIASLGCFG 73
            :||.||.||::|.|:|:.::..||.|.|....:..|:.|:..:.|..|||.|..|.:|:..||:|
  Fly    11 VKYTLFGFNLIFLITGIILIAVGAGVGAVYTGYKLFLAGKFFSIPTFLIVIGSFIIIISFFGCWG 75

  Fly    74 AIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQESIKRSNS----EDTMAWD 134
            |:||:..|:::|:|:||:|||:|||.||:..|.:.|...::|.||..|:...||    ..|..||
  Fly    76 ALKENYCLVLSFSVMLAIIFILELAAGISGYVLRNDASDLIKTSLTYSLNEYNSINPNATTKLWD 140

  Fly   135 NIQQKLMCCGVDSPADWRTLSANKTLPGSCCQPQYIDSTVG--HCLESPALGKDKYFQVGCVGKL 197
            :||.:..||||.|..||.|...|..||.|||....  ..||  .|..:.:...|:: :|||:...
  Fly   141 DIQDEFECCGVTSYNDWITAFPNGDLPISCCNVHV--GAVGTFTCNNAQSSVADRH-KVGCLDGF 202

  Fly   198 KDRIEKNAIILIGVGIGIAFIQILGIVLACYLANSIR 234
            ...|..:|:.|...|:.||.:|..|::.|||:|..|:
  Fly   203 SGYISAHAVSLGAAGVVIAILQFFGVIFACYIAREIK 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspannin 9..233 CDD:278750 87/229 (38%)
uroplakin_I_like_LEL 102..205 CDD:239409 35/108 (32%)
Tsp29FaNP_001162915.1 Tetraspannin 11..238 CDD:278750 87/229 (38%)
tetraspanin_LEL 106..210 CDD:239401 35/106 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442949
Domainoid 1 1.000 133 1.000 Domainoid score I5027
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 140 1.000 Inparanoid score I4480
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138800at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4418
SonicParanoid 1 1.000 - - X3621
98.930

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