DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and tspan17

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:XP_073777297.1 Gene:tspan17 / 324950 ZFINID:ZDB-GENE-030131-3673 Length:311 Species:Danio rerio


Alignment Length:255 Identity:76/255 - (29%)
Similarity:124/255 - (48%) Gaps:43/255 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SCGPSLIKYVLFAFNVLF-----AISGLGI-------LIAGAVVLADVNEFNHFVEGRVLAPPIV 55
            ||   .:||.||.||::|     |..|:|:       :::....:.|:..|:         |..:
Zfish    21 SC---CVKYFLFGFNIIFWLLGAAFLGIGLWAWAEKGVLSNISSITDLGGFD---------PVWL 73

  Fly    56 LIVTGLIIFLIASLGCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQE 120
            .||.|.::|::...||.||::|:..||..|:|.|.:||.:||..||.|.|||..::..:...:..
Zfish    74 FIVVGGVMFILGFAGCIGALRENTFLLKFFSVFLGLIFFLELTAGILAFVFKDWIKDQLNFFINN 138

  Fly   121 SIK--RSNSEDTMAWDNIQQKLMCCGVDSPADWR-TLSANKT----------LPGSCC----QPQ 168
            ::|  |.:.:.....|..|:...|||...|.||. .:..|.|          :|.|||    ...
Zfish   139 NVKAYRDDIDLQNLIDFAQEYWSCCGAHGPNDWNLNIYFNCTDFNPSRERCGVPFSCCVKDPAED 203

  Fly   169 YIDSTVGHCLE-SPALGKDKY-FQVGCVGKLKDRIEKNAIILIGVGIGIAFIQILGIVLA 226
            .:::..|:.:. ...|.:.|| :..||||:.:..::.|.|::.||.:|||.:||.||.||
Zfish   204 VLNTQCGYDVRLQVELDQQKYIYTKGCVGQFEKWLQDNLIVVAGVFVGIALLQIFGICLA 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 74/249 (30%)
tetraspanin_LEL <134..205 CDD:351888 22/87 (25%)
tspan17XP_073777297.1 None

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