DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and cd82b

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_997828.1 Gene:cd82b / 324137 ZFINID:ZDB-GENE-030131-2857 Length:256 Species:Danio rerio


Alignment Length:253 Identity:75/253 - (29%)
Similarity:116/253 - (45%) Gaps:40/253 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KYVLFAFNVLFAISGLGILIAGAVVLADVNEFNHFVEGRVLAPPI---VLIVTGLIIFLIASLGC 71
            ||.||.||:||.|.|..|:..|..|..|...|...::....:..:   :||..|.:..|:..|||
Zfish    10 KYFLFLFNLLFFILGAVIMGFGLWVRLDSQSFLTVLQESSTSLKVGAYILIGIGSLSMLMGFLGC 74

  Fly    72 FGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKD-LEGMVKNSLQESI-----KRSNSEDT 130
            .|||.|...||..:...|.:|.|.::...:.. .|::| |:|...|.:.:.:     ..:.||| 
Zfish    75 IGAIYEIRCLLGLYFTCLLLILIAQVTAAVLI-YFQRDLLKGETYNIVNKILVNYTGSNNTSED- 137

  Fly   131 MAWDNIQQKLMCCGVDSPADWR---TLSANKTLPGSCCQPQYIDSTVGHCLESPALGKDK----- 187
             |||.||:.:.|||....:||:   .:..|..:...|           .|......|.||     
Zfish   138 -AWDYIQRTMKCCGWSGQSDWKENVMIKNNSKILYPC-----------SCRNESISGSDKQEKGF 190

  Fly   188 ---------YFQVGCVGKLKDRIEKNAIILIGVGIGIAFIQILGIVLACYLANSIRQE 236
                     .|..||:..|:|.|.:|..:::||.:|||.|::||::|:..|..|::||
Zfish   191 CEGLSPQWPVFTKGCISSLEDWILRNCGVILGVCVGIAVIELLGMILSMCLCKSVQQE 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 72/246 (29%)
tetraspanin_LEL <134..205 CDD:351888 20/87 (23%)
cd82bNP_997828.1 Tetraspanin 24..243 CDD:459767 63/232 (27%)
CD37_CD82_like_LEL 106..218 CDD:239413 31/125 (25%)

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