DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and Tsp3A

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_525054.2 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster


Alignment Length:275 Identity:71/275 - (25%)
Similarity:126/275 - (45%) Gaps:60/275 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IKYVLFAFNVLFAISGLGILIA--------------GAVVLADVNEFNHFVEGRVLAPPIVLIVT 59
            :||::|..|.:|.:.| |:|:.              |:|.|.  |.::.|     |...:|:|:.
  Fly    43 VKYMIFLLNFVFWLFG-GLLLGIGVYAFRDKWEDANGSVRLE--NFYDVF-----LNISLVMILA 99

  Fly    60 GLIIFLIASLGCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQESIKR 124
            |.:|||::..||.||::|:..||..:::.|.:.|::|:|:.|...|..:.:...::......|..
  Fly   100 GTVIFLVSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVCPQYMNTFLEKQFTHKIIH 164

  Fly   125 SNSEDTMAW---DNIQQKLMCCGVDSPA--DWRTLSANK------------TLPGSCCQPQYIDS 172
            |..:|....   |..||:..|||:.:..  ||   |.|:            .:|.|||    |::
  Fly   165 SYRDDPDLQNFIDFAQQEFKCCGLSNSGYQDW---SKNEYFNCSSPSVEKCGVPYSCC----INA 222

  Fly   173 T----------VGHCLES---PALGKDKYFQVGCVGKLKDRIEKNAIILIGVGIGIAFIQILGIV 224
            |          .|:.:::   |...| ..:..||:..::...|.|..::.|..:|||.||:|.|.
  Fly   223 TDISSGLVNIMCGYGVQNAPVPEATK-LIWTSGCIEIVRVWAEHNLYVIAGNALGIALIQLLVIY 286

  Fly   225 LACYLANSIRQERAK 239
            ||..|...|..::::
  Fly   287 LAKTLEGQIELQKSR 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 70/265 (26%)
tetraspanin_LEL <134..205 CDD:351888 22/97 (23%)
Tsp3ANP_525054.2 Tetraspanin 43..>187 CDD:459767 40/151 (26%)
penumbra_like_LEL 144..267 CDD:239411 26/130 (20%)

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