Protein Alignment Tsp47F and Tspan18

DIOPT Version :10

• Sequence 1: NP_725044.1
• Gene: Tsp47F / 36230
• FlyBaseID: FBgn0033629
• Length: 239
• Species: Drosophila melanogaster
• Sequence 2: NP_001101220.1
• Gene: Tspan18 / 311210
• RGDID: 1560411
• Length: 248
• Species: Rattus norvegicus
• Alignment Length: 244
• Identity: 71/244 - (29%)
• Similarity: 117/244 - (47%)
• Gaps: 18/244 - (7%)

  Fly     7 SLIKYVLFAFNVLFAISGLGILIAGAVVLADVNEFNHFVEGRVL--APPIVLIVTGLIIFLIASL 69
            |.:||::|.||....:.|..:|..|..||.|...|...|....|  ....|::..|.::||:..|
  Rat     7 SCMKYLMFVFNFFVFLGGACLLGVGIWVLVDPTGFREIVATNPLLTTGAYVVLAMGGLLFLLGFL 71

  Fly    70 GCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDL--EGMVKNSLQESIKRSNSEDTMA 132
            ||.||::|:..||:.|.:.:.:||:|||:..|.|.:|::.|  |...| .|.:..:..|..|..:
  Rat    72 GCCGAVRENRCLLLFFFLFILIIFLVELSAAILAFIFREHLTREFFTK-ELTKHYQGDNDTDVFS 135

  Fly   133 --WDNIQQKLMCCGVDSPADWRTLSANKTL-------PGSCC--QPQYIDSTVGHCLESPALGKD 186
              |:::.....||||:.|.|::..|..:.|       |.:||  :||..|..| ...|...||::
  Rat   136 ATWNSVMITFGCCGVNGPEDFKLASVFRLLTLDTEEVPKACCRREPQTRDGVV-LSREECQLGRN 199

  Fly   187 KYF-QVGCVGKLKDRIEKNAIILIGVGIGIAFIQILGIVLACYLANSIR 234
            .:. :.||...:.:..|....:.....||:..|::..:|.|..|...|:
  Rat   200 PFINKQGCYTVILNTFETYVYLAGAFAIGVLAIELFLMVFAMCLFRGIQ 248

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp47F	NP_725044.1	Tetraspanin	9..231	CDD:459767	69/237 (29%)
		tetraspanin_LEL	<134..205	CDD:351888	21/80 (26%)
Tspan18	NP_001101220.1	Tetraspanin	10..245	CDD:459767	69/236 (29%)
		uroplakin_I_like_LEL	105..218	CDD:239409	30/114 (26%)