DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and Tsp2A

DIOPT Version :9

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_001188523.1 Gene:Tsp2A / 31080 FlyBaseID:FBgn0024361 Length:244 Species:Drosophila melanogaster


Alignment Length:243 Identity:60/243 - (24%)
Similarity:104/243 - (42%) Gaps:41/243 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IKYVLFAFNVL-FAISGLGILIAGAVVLADVNEFNHFVEGRVLAPP------IVLIVTGLIIFLI 66
            :||.||.||:: :.||  ..|.|..|.|.....||.::  |:|...      .|||...:::..:
  Fly    19 VKYTLFCFNIVAWMIS--TALFALTVWLRAEPGFNDWL--RILEAQSFYIGVYVLIGISIVMMAV 79

  Fly    67 ASLGCFGAIKESPTLLITFA---VLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQESIKRSNSE 128
            :.|||..|:.|:...|..|.   |...:..:...||.:..|.....|:.::..||:..:  :.||
  Fly    80 SFLGCLSALMENTLALFVFVGTQVFGFIAIVAGSAVLLQFSTINSSLQPLLNVSLRGFV--ATSE 142

  Fly   129 DTMAWDN-----IQQKLMCCGVDSPADWRTLSANKTLPGSCCQPQYIDSTVGHCLESPALGKDKY 188
            .|  :.|     ||:.:.|||...|  |..|...:.||.||     .|:..|:.           
  Fly   143 YT--YSNYVLTMIQENIGCCGATGP--WDYLDLRQPLPSSC-----RDTVSGNA----------- 187

  Fly   189 FQVGCVGKLKDRIEKNAIILIGVGIGIAFIQILGIVLACYLANSIRQE 236
            |..|||.:|....|.....::.:.:.:..:.::..|::..|..::::|
  Fly   188 FFNGCVDELTWFFEGKTGWIVALAMTLGLLNVICAVMSFVLVQAVKKE 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspannin 9..233 CDD:278750 59/238 (25%)
uroplakin_I_like_LEL 102..205 CDD:239409 28/107 (26%)
Tsp2ANP_001188523.1 Tetraspannin 18..232 CDD:278750 59/238 (25%)
tetraspanin_LEL 116..204 CDD:239401 28/109 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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