Protein Alignment Tsp47F and Tspan17

DIOPT Version :10

• Sequence 1: NP_725044.1
• Gene: Tsp47F / 36230
• FlyBaseID: FBgn0033629
• Length: 239
• Species: Drosophila melanogaster
• Sequence 2: XP_006253692.1
• Gene: Tspan17 / 306771
• RGDID: 1311167
• Length: 281
• Species: Rattus norvegicus
• Alignment Length: 260
• Identity: 78/260 - (30%)
• Similarity: 121/260 - (46%)
• Gaps: 32/260 - (12%)

  Fly     4 CGPSLIKYVLFAFNVLFAISGLGILIAGAVVLADVNEFNHFVEGRV----LAPPIVLIVTGLIIF 64
            ||    ||.||.||::|.:.|...|..|.....:....:: :.|..    |.|..:.:|.|.|:.
  Rat    16 CG----KYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSN-ISGLTDLGGLDPVWLFVVIGGIMS 75

  Fly    65 LIASLGCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQESIK--RSNS 127
            ::...||.||::|:..||..|:|.|.:||.:|||.||.|.|||..:...:...:..::|  |.:.
  Rat    76 VLGFAGCIGALRENTFLLKFFSVFLGLIFFLELAAGILAFVFKDWIRDQLNLFINNNVKAYRDDI 140

  Fly   128 EDTMAWDNIQQKLMCCGVDSPADWR-TLSANKT----------LPGSCC----QPQYIDSTVGH- 176
            :.....|..|:...|||...|.||. .:..|.|          :|.|||    ....:::..|:
  Rat   141 DLQNLIDFAQEYWSCCGARGPNDWNLNIYFNCTDLNPSRERCGVPFSCCVRDPAEDVLNTQCGYD 205

  Fly   177 ---CLESPALGKDKYFQVGCVGKLKDRIEKNAIILIGVGIGIAFIQILGIVLACYLANSIRQERA 238
               .||....|  ..:..||||:.:..::.|.|::.||.:.||.:||.||.||..|.:.|...:|
  Rat   206 IRLKLELEQQG--SIYTKGCVGQFEKWLQDNLIVVAGVLVAIALLQICGICLAQNLVSDIEAVKA 268

  Fly   239  238
              Rat   269  268

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp47F	NP_725044.1	Tetraspanin	9..231	CDD:459767	74/246 (30%)
		tetraspanin_LEL	<134..205	CDD:351888	22/89 (25%)
Tspan17	XP_006253692.1	Tetraspanin	18..260	CDD:459767	73/244 (30%)
		TM4SF9_like_LEL	115..235	CDD:239412	27/121 (22%)