Protein Alignment Tsp47F and Upk1b

DIOPT Version :10

• Sequence 1: NP_725044.1
• Gene: Tsp47F / 36230
• FlyBaseID: FBgn0033629
• Length: 239
• Species: Drosophila melanogaster
• Sequence 2: NP_001019424.1
• Gene: Upk1b / 303924
• RGDID: 1307806
• Length: 260
• Species: Rattus norvegicus
• Alignment Length: 243
• Identity: 51/243 - (20%)
• Similarity: 100/243 - (41%)
• Gaps: 52/243 - (21%)

  Fly    26 GILIAGAVV-----LADVNEFNHFVEGRVLAPPI--------------VLIVTGLIIFLIASLGC 71
            |:||.|.|:     :|...|...||..:....|:              :.:..|:.:|.::.|..
  Rat    13 GLLIFGHVIVGMCGIALTAECIFFVSDQHSLYPLLEATNNDDIFGAAWIGMFVGICLFCLSVLAI 77

  Fly    72 FGAIKESPTLLITFAVLLAVIFIVELAVGIAA---------SVFKKDLEGMVKNSL--QESIKRS 125
            .|.:|.:..:|:.:.:::.:::..|:|..|.|         ::|.|.:....:|:.  ....|..
  Rat    78 VGIMKSNRKILLAYFIMMFIVYGFEVASCITAATQRDFFTTNLFLKQMLMRYQNNSPPTNDDKWK 142

  Fly   126 NSEDTMAWDNIQQKLMCCGVDSPADWRTLS---------ANKTLPGSCCQPQYIDSTVGHCLESP 181
            ||..|..||.:..:..||||:.|:||:..:         |:...|..||....:...:.  |::.
  Rat   143 NSYVTKTWDRLMLQDHCCGVNGPSDWQKYTSAFRVENSDADYPWPRQCCVMDKLQEPLN--LDAC 205

  Fly   182 ALGKDKYF-QVGCVGKLKDRIEKNAIILIGVGIGIAFIQILGIVLACY 228
            .||...|: ..||...:...::::|       .|:|:   .|..:.|:
  Rat   206 KLGVPGYYHSQGCYELISGPMDRHA-------WGVAW---FGFAILCW 243

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp47F	NP_725044.1	Tetraspanin	9..231	CDD:459767	51/243 (21%)
		tetraspanin_LEL	<134..205	CDD:351888	18/80 (23%)
Upk1b	NP_001019424.1	Tetraspanin	14..>161	CDD:459767	29/146 (20%)
		uroplakin_I_like_LEL	120..230	CDD:239409	26/111 (23%)