DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and Cd37

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:XP_017444339.1 Gene:Cd37 / 29185 RGDID:62035 Length:396 Species:Rattus norvegicus


Alignment Length:277 Identity:83/277 - (29%)
Similarity:125/277 - (45%) Gaps:60/277 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SLIKYVLFAFNVLFAISGLGILIAGAVVLADVNEFNHFVEGRVLAP----PIVLIVTGLIIFLIA 67
            |||||.||.||:.|.:.|..|...|..:|.|...|..|| |....|    ..||.|:|::...:|
  Rat    32 SLIKYFLFVFNLFFFVLGGLIFCFGTWILIDKTSFVSFV-GLSFVPLQTWSKVLSVSGVLTMALA 95

  Fly    68 SLGCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQESIK--RSNSEDT 130
            .|||.||:||...||..:..:|.::|..::.:||..|..:..||..|:..:..:|:  |:|.::|
  Rat    96 LLGCVGALKELRCLLGLYFGMLLLLFATQITLGILISTQRVRLERRVQELVLRTIQSYRTNPDET 160

  Fly   131 MA---WDNIQQKLMCCGVDSPADW---RTLSANKT----LPGSCCQPQYIDSTVGHCLESPALGK 185
            .|   ||..|.:|.|||..||.||   :.|.||.:    :|.||     .:||.    .:.:.|.
  Rat   161 AAEESWDYAQFQLRCCGWQSPRDWNKAQMLKANGSEELFVPCSC-----YNSTA----TNDSSGF 216

  Fly   186 DKYF-----------------------------QVGCVGKLKDRIEKNAIILIGVGIGIAFIQIL 221
            ||.|                             :.||...|:..:..|.|.::|:.:|:..:::.
  Rat   217 DKLFLSQLSRLGPRAKLRQTADICALPAKAHIYREGCARSLQKWLHNNIISIVGICLGVGLLEVS 281

  Fly   222 GIVLACYLANSIRQERA 238
            |:.|...|     |.||
  Rat   282 GMALCLQL-----QRRA 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 78/266 (29%)
tetraspanin_LEL <134..205 CDD:351888 25/106 (24%)
Cd37XP_017444339.1 Tetraspanin 49..>177 CDD:459767 42/128 (33%)
CD37_CD82_like_LEL 131..266 CDD:239413 36/143 (25%)

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