DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and tsp-21

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_001370185.1 Gene:tsp-21 / 259720 WormBaseID:WBGene00023491 Length:301 Species:Caenorhabditis elegans


Alignment Length:242 Identity:66/242 - (27%)
Similarity:117/242 - (48%) Gaps:18/242 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 FAFNVLFAISGLGILIAGAVVLADVNEFNHF--VEGRVLAPPIVLIVTGLIIFLIASLGCFGAIK 76
            |..||.|.||||..||.|..:.:..|.|...  .....|:...:.:.||:.||:|.::|..|...
 Worm    18 FLANVCFLISGLSSLIVGVWLYSSKNNFIELTPTSYSALSAAGLCVFTGVTIFIIVAVGYLGVSW 82

  Fly    77 ESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQESIKRS--------NSEDTMAW 133
            .:.:||.::...:.::.:|.....|..|:.|::.:..::.|:..:|..:        ..:.::.|
 Worm    83 SNKSLLYSYIGFVILLILVHGIARITGSLHKEEAKENLRKSMLHNINTTAVVTKIGREIKLSLTW 147

  Fly   134 DNIQQKLMCCGVDSPADWR---TLSANKTLPGSCCQPQYIDSTVG--HCLESPALGKDKYFQVGC 193
            |::|::|.|||||:..||.   ....|...|.|||.||:.|:..|  :|.:.|. .:...:|.||
 Worm   148 DHLQRELQCCGVDNYTDWHYSVHWPNNLYTPDSCCDPQHFDAENGTENCGKLPD-EQSLLYQKGC 211

  Fly   194 VGKLKDRIEKNAIILIGVGIGIAF-IQILGIVLACYLANSIRQERAK 239
            ..|..|.:..: |||:.....|.| ::||.::|:..:...::..|.|
 Worm   212 FPKFSDWLYHH-IILVNWVTSILFVVEILLLILSLVVLRVLKNSRHK 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 64/232 (28%)
tetraspanin_LEL <134..205 CDD:351888 26/75 (35%)
tsp-21NP_001370185.1 Tetraspanin 17..>158 CDD:459767 34/139 (24%)
CD151_like_LEL 106..223 CDD:239408 32/118 (27%)

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