DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and Cd81

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:XP_063138178.1 Gene:Cd81 / 25621 RGDID:2315 Length:248 Species:Rattus norvegicus


Alignment Length:227 Identity:64/227 - (28%)
Similarity:103/227 - (45%) Gaps:34/227 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IKYVLFAFNVLFAISGLGILIAGAVVL---ADVNEFNHFVEGRVLAPP------IVLIVTGLIIF 64
            |||:||.||.:|.::| |:::..|:.|   .......:...|...||.      .:||..|.::.
  Rat    10 IKYLLFVFNFVFWLAG-GVILGVALWLRHDPQTTSLLYLELGDKPAPSTFYVGIYILIAVGAVMM 73

  Fly    65 LIASLGCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFK----KDLEGMVKNSLQESIKRS 125
            .:..|||:|||:||..||.||...|.::|..|:|.||...|.|    ||::.....:||:::...
  Rat    74 FVGFLGCYGAIQESQCLLGTFFTCLVILFACEVAAGIWGFVNKDQIAKDVKQFYDQALQQAVMDD 138

  Fly   126 NSEDTMA-WDNIQQKLMCCGVDSPADWRTLSANKTLPGSCCQPQYIDSTVGHCLESPALGKDKYF 189
            ::.:..| .....:.|.|||    ::..|......|..|.| |...:|.      :..|.:|   
  Rat   139 DANNAKAVVKTFHETLNCCG----SNTLTTLTTTVLRNSLC-PSSSNSF------TQLLKED--- 189

  Fly   190 QVGCVGKLKDRIEKNAIILIGV-GIGIAFIQI 220
               |..|: |.:....:.|||: .|.:|.|.:
  Rat   190 ---CHQKI-DELFSGKLYLIGIAAIVVAVIMV 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 64/227 (28%)
tetraspanin_LEL <134..205 CDD:351888 15/70 (21%)
Cd81XP_063138178.1 None

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