DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and Cd9

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:XP_063141640.1 Gene:Cd9 / 24936 RGDID:2318 Length:249 Species:Rattus norvegicus


Alignment Length:232 Identity:63/232 - (27%)
Similarity:99/232 - (42%) Gaps:43/232 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GPSLIKYVLFAFNVLFAISGLGILIAGAVVLAD-------VNEFNH--FVEGRVLAPPIVLIVTG 60
            |...|||:||.||.:|.::|:.:|..|..:..|       ..|.||  |..|     ..:||..|
  Rat     6 GSKCIKYLLFGFNFIFWLAGIAVLAIGLWLRFDSQTKSIFEQETNHSSFYTG-----VYILIGAG 65

  Fly    61 LIIFLIASLGCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFK----KDLEGMVKNSLQES 121
            .::.|:..|||.||::||..:|..|...|.|||.:|:|..:.....|    |:|:...|::.|: 
  Rat    66 ALMMLVGFLGCCGAVQESQCMLGLFFGFLLVIFAIEIAAAVWGYTHKDEVIKELQEFYKDTYQK- 129

  Fly   122 IKRSNSEDTMAWDNIQQKLMCCGVDSPADWRTLSANKTLPGSCCQPQYIDSTVGHCLESPALGKD 186
            ::..:.........|...|.|||:..       ...:.:...|.:.|.::|              
  Rat   130 LRNKDEPQRETLKAIHMALNCCGIAG-------GVEQFISDICPKKQVLES-------------- 173

  Fly   187 KYFQVGCVGKLKDRIEKNAIILIG-VGIGIAFIQILG 222
              |||.......|.:..:...:|| ||||||.:.:.|
  Rat   174 --FQVKSCPDAIDEVFHSKFHIIGAVGIGIAVVMVSG 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 62/228 (27%)
tetraspanin_LEL <134..205 CDD:351888 12/70 (17%)
Cd9XP_063141640.1 None

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