Protein Alignment Tsp47F and Upk1b

DIOPT Version :10

• Sequence 1: NP_725044.1
• Gene: Tsp47F / 36230
• FlyBaseID: FBgn0033629
• Length: 239
• Species: Drosophila melanogaster
• Sequence 2: NP_849255.2
• Gene: Upk1b / 22268
• MGIID: 98912
• Length: 260
• Species: Mus musculus
• Alignment Length: 245
• Identity: 51/245 - (20%)
• Similarity: 102/245 - (41%)
• Gaps: 56/245 - (22%)

  Fly    26 GILIAGAVV-----LADVNEFNHFVEGRVLAPPI--------------VLIVTGLIIFLIASLGC 71
            |:||.|.|:     :|...|...||..:....|:              :.:..|:.:|.::.|..
Mouse    13 GLLIFGHVIVGMCGIALTAECIFFVSDQHSLYPLLEATNNDDIFGAAWIGMFVGICLFCLSVLAI 77

  Fly    72 FGAIKESPTLLITFAVLLAVIFIVELAVGIAASV----FKKDLEGMVKNSL---QESIKRSNSED 129
            .|.:|.:..:|:.:.:::.:::..|:|..|.|:.    |..:|  .:|..|   |.:...:|.::
Mouse    78 VGIMKSNRKILLAYFIMMFIVYGFEVASCITAATQRDFFTTNL--FLKQMLMRYQNNSPPTNDDE 140

  Fly   130 ------TMAWDNIQQKLMCCGVDSPADWRTLS---------ANKTLPGSCCQPQYIDSTVGHCLE 179
                  |..||.:..:..||||:.|:||:..:         |:...|..||....:...:.  |:
Mouse   141 WKNNGVTKTWDRLMLQDHCCGVNGPSDWQKYTSAFRVENNDADYPWPRQCCVMDKLKEPLN--LD 203

  Fly   180 SPALGKDKYF-QVGCVGKLKDRIEKNAIILIGVGIGIAFIQILGIVLACY 228
            :..||...|: ..||...:...::::|       .|:|:   .|..:.|:
Mouse   204 ACKLGVPGYYHSQGCYELISGPMDRHA-------WGVAW---FGFAILCW 243

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp47F	NP_725044.1	Tetraspanin	9..231	CDD:459767	51/245 (21%)
		tetraspanin_LEL	<134..205	CDD:351888	18/80 (23%)
Upk1b	NP_849255.2	Tetraspanin	14..>161	CDD:459767	29/148 (20%)
		uroplakin_I_like_LEL	120..230	CDD:239409	25/113 (22%)