DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp47F and Tspan8

DIOPT Version :10

Sequence 1:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_666122.1 Gene:Tspan8 / 216350 MGIID:2384918 Length:235 Species:Mus musculus


Alignment Length:244 Identity:72/244 - (29%)
Similarity:120/244 - (49%) Gaps:42/244 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SLIKYVLFAFNVLFAISG---LGILI-------AGAVVLADVNEFNHFVEGRVLAPPIVLIVTGL 61
            |.:||.:|.||.||.:.|   ||:.|       ...::.:..:..|.|:...      :||..|.
Mouse     6 SCLKYSMFFFNFLFWVCGTLILGLAIWVRVSKDGKEIITSGDSSTNPFIAVN------ILIAVGS 64

  Fly    62 IIFLIASLGCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQESIK--R 124
            ||.::..|||.||:|||..:|:.|.:.|.:|.|:::|.||..:.||.:...::..:|.|:.|  .
Mouse    65 IIMVLGFLGCCGAVKESRCMLLLFFIGLLLILILQVAAGILGAAFKPEYNRILNETLYENAKLLS 129

  Fly   125 SNSEDTMAWDN----IQQKLMCCGVDS-PADW--RTLSANKT--LPGSCCQPQYIDSTVGHCLES 180
            .|:::...:..    .|.:..|||::: .|||  ..:.|.::  ..|:.| ..|..|:|      
Mouse   130 DNTDEAKDFQKAMIVFQSEFKCCGLENGAADWGNNFVEAKESCQCTGTDC-ATYQGSSV------ 187

  Fly   181 PALGKDKYFQVGCVGKLKDRIEKNAIILIGVGIGIAFIQILGIVLACYL 229
                    :...|:..:||..|||.||:||:..|:|.|:|||:|.:..|
Mouse   188 --------YPKTCLSLIKDLFEKNIIIVIGIAFGLAVIEILGLVFSMVL 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 71/242 (29%)
tetraspanin_LEL <134..205 CDD:351888 18/79 (23%)
Tspan8NP_666122.1 Tetraspanin 8..230 CDD:459767 71/242 (29%)
TM4SF3_like_LEL 106..204 CDD:239407 24/112 (21%)

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